DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl6 and nep-20

DIOPT Version :9

Sequence 1:NP_609023.3 Gene:Nepl6 / 33893 FlyBaseID:FBgn0259716 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001317749.1 Gene:nep-20 / 188176 WormBaseID:WBGene00020293 Length:834 Species:Caenorhabditis elegans


Alignment Length:753 Identity:145/753 - (19%)
Similarity:263/753 - (34%) Gaps:226/753 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WLIACLFI-------VPICAAPTTQNVEADPNSRLMNNILSYVAEDSSACGTYFQYACGKY---- 55
            ||:  |||       ..:|.:|..        ..|...:.:|.....|.|..:::..||||    
 Worm   199 WLL--LFIGARQDEKPSLCESPQC--------ITLAFELSAYQDTSVSKCHNFYKATCGKYKHHQ 253

  Fly    56 -AVRHRDDPFTEIIQMLDHKVNGNLVQLMHELHQRSQSPGFNESSVEAK----VLHFYRTCREAP 115
             ..:|||....|:::           :::.|..:|      ||||:.:|    :...:..|.:..
 Worm   254 ALDKHRDAKKKEVVK-----------RIVREFLRR------NESSITSKFEPAIRLMFGKCNKFS 301

  Fly   116 PSTRKMEHYLRLAPPGQALTWPQFMPRGEPWPKAQFKWMKSLGHLYRY-------GFTNVLVNVL 173
            .:...::.:..:...|             |||..:..|:..:.:|..|       |||:..:..|
 Worm   302 QNKTYLDIFKDIEKIG-------------PWPVLKSDWVDVMFNLNDYLLSLVELGFTDFGLFKL 353

  Fly   174 -----------VLRSSENSNRFRLD------ISMPSLEGDAQHLGGFL-------STLATLQIIG 214
                       |:..||.....:|:      :....::.|.|.|..:|       |.|..:.:.|
 Worm   354 EFRQLAFGQFPVIAPSEQKQGNQLEKIILEILEANGVQADRQKLSKYLREYSEFKSQLRHMSLEG 418

  Fly   215 VPTK-----------SILPLVRK----------IRRLESAIRVLTEVDDDDESETWTLRQWEYKT 258
            ...|           :|..||:|          :||::|.|.:                      
 Worm   419 TSVKYIRYNASTLSVNISALVQKMAPMSTSSGLVRRIQSGILI---------------------- 461

  Fly   259 GYAWQGFVESIVGHSVSHHYVMQAQNAKYFTG--LKRLMDSTDAEVVANYIMTRFVLYLIDDFID 321
                                    .|:..|.|  |..::..|....:|||::..|          
 Worm   462 ------------------------TNSSSFFGKNLDAIIQQTHKRTLANYLIFHF---------- 492

  Fly   322 SNEHIDCVTDMRRNMNLASNLLYKER----FLDPATLQQYTQEVTKVFEQLRRQFLLQINENRLG 382
                ||.||     .:|.|...:.|.    .|...:||..:|:.              ::|...|
 Worm   493 ----IDAVT-----FDLTSGAKHSEHTLIDLLPRGSLQVLSQDF--------------VDEEDQG 534

  Fly   383 LTSEQNSMVATKAQHVV--------LNIGNLPRGRDHRSFVSRHYEDLV----FPLPDFDYAREH 435
            :..|   |.....:|||        |:.|:|......|..:.|..:|::    :||...:...|.
 Worm   535 VMVE---MAKDLKKHVVEMISEGSSLDKGHLVFEEKERRKLIRKVQDILVVTKYPLEILNQNFEK 596

  Fly   436 LNLLEFRTRKQVLQLNQSAPTPDEFFYLS---DP-KTAMSSGPYYLMRLNIIVVPHGLLQEPFFA 496
            |||....:..:::|..:...:.....||.   || ...|....:|....|.:::...::..|:|.
 Worm   597 LNLTYSDSLHKIIQKLRRFRSEQLIEYLGGDLDPTDKGMWGSAHYEQATNDLIIIAPIIDGPYFD 661

  Fly   497 ADSHDIFKYSLLGFVLAHELMHSVDTVGLYYDRYGNIHEIGPQISSSPRFVAGLQCLNR--NSTQ 559
            ....:......:||:::.||..|:|:|.:..|..|:. |...:..|..||...::|..:  ..|:
 Worm   662 TSYPNYVNIFFMGFIISRELGRSLDSVRIRKDEKGHT-ENWLKSESLKRFDNNVKCWRKKITGTR 725

  Fly   560 YLDERIADIAGLDLAYSTYFQNSSQMS------LTDFTTIPPQQIFFLNLAQFFC-----GDGDP 613
            :|:|.:||..|.:.::....:...:|:      :..:.::..:||||...|.:||     ..|:.
 Worm   726 FLNEMLADHVGHEASFMALKKWEKEMNGTIVEKIRGYESMTMEQIFFHLQALYFCRPPGGSTGEL 790

  Fly   614 INFVGHDNDETRLQQMLNGFAPFHEAFGCPAKSNQPEK 651
            .......:..||:.:.......|.:||||.:..|...|
 Worm   791 TAKDARQHYSTRVNEAFKNMPQFAKAFGCSSNQNMNSK 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl6NP_609023.3 M13 42..653 CDD:189000 136/706 (19%)
nep-20NP_001317749.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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