DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl6 and nep-6

DIOPT Version :9

Sequence 1:NP_609023.3 Gene:Nepl6 / 33893 FlyBaseID:FBgn0259716 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_494537.1 Gene:nep-6 / 184628 WormBaseID:WBGene00017550 Length:726 Species:Caenorhabditis elegans


Alignment Length:743 Identity:150/743 - (20%)
Similarity:275/743 - (37%) Gaps:188/743 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PICAAPTTQNVEADPNS-RLMNNILSYVAEDSSACGTYFQYACGKYAVRHRDDPFTEIIQMLDHK 74
            |:..|...:||...|.. .|.:.:|::.......|..:::.|||||:               :|:
 Worm    74 PVTQASKPRNVCETPGCVTLADQLLNFQDPSVDPCQDFYKAACGKYS---------------EHE 123

  Fly    75 VNGNLVQLMHELHQRSQSPGF------NESSVEAKVLHFYRTCR--------EAPPSTRKMEHYL 125
            |....:|....:.|| ....|      :||..|..:...||||.        .|...|...|.:.
 Worm   124 VANRRLQKKDIIIQR-MIKNFLLKNETSESKSENVMRQVYRTCEGLKNEEIFNANMKTAFRELFK 187

  Fly   126 RLAPPGQALTWPQFMPRGEPWPKAQFKWMKSLGHLYRYGFTNVLVNVLVLRSSENSNRFRL-DIS 189
            .:...|.             ||.|...|.::     :.....:|:|::.|.|| |...|:: ...
 Worm   188 DIQKIGS-------------WPAADKNWDET-----KLNLNEMLLNIVKLGSS-NFGLFQIRPTE 233

  Fly   190 MPSLEGDAQHLGGFLSTLATLQIIGVPTKSILPLVRKIRRLESAIRVLTEVDDDDESETWTLRQW 254
            :|.|| .|..:.......|..|.|      |..::.| ..|:....|:.:..:|..:...||.|:
 Worm   234 VPFLE-VAPDMARSPKVSANFQQI------IFDILEK-NGLQPDENVIADDVEDYITLEETLSQY 290

  Fly   255 EY-----KTGYA----------WQGFVESIVG-------------HSVSHHYVMQAQNAKYF--- 288
            .|     |..::          .:..:|.::.             ..|:|      :::.:|   
 Worm   291 AYDYNAEKVQFSKLQAQVPSLKLEKIIEEMMNPNRKKLLVTKVKPRMVAH------KHSLFFDEK 349

  Fly   289 TGLKRLMDSTDAEVVANYIMTRFVLYLIDDFIDSNEHIDCVTDMRRNMNLASNLLYKE------- 346
            ..|::|:.||....:|||:    :.|.:|..::             .:::..|::.|.       
 Worm   350 MNLEKLLKSTPKRTLANYL----IFYYMDHAMN-------------GLSVHDNVIKKRNCEKLVI 397

  Fly   347 RFLDPATLQQYTQE---------VTKVFEQLRRQFLLQINENR-LGLTSEQNSMVATKAQHVVLN 401
            .:|..|:|:.:.:.         |.::.|:.::.|:..:.|:. ||..|::|:::  |.:.:...
 Worm   398 EYLPKASLRVFVRNHFEKGNLKIVDEMAEETKKSFIEMLQESTWLGADSKKNAIL--KLEKMGKM 460

  Fly   402 IGNLPRGRDHRSFVSRHYEDLVFPLPDFDY------AREHLNL-LEFRTRKQVLQLNQSAPTPDE 459
            || .|:..:.:..:.:.:|.|.....|..|      .|.|:.. :||          .:..||  
 Worm   461 IG-YPKEFEKKGALDKMFETLKLLPKDTLYGILKKIGRFHMEQGIEF----------VALETP-- 512

  Fly   460 FFYLSDP-KTAMSSGPYYLMR--LNIIVVPHGLLQEPFFAADSHDIFKYSLLGFVLAHELMHSVD 521
                .|| ...:.:..:|..|  |:.:|   |.:.:|.|.|........:|.|.:||||..|..|
 Worm   513 ----MDPVLPVLMTNAFYTDRNHLSFLV---GYMDDPLFDATYPKYVNIALTGNILAHETSHGFD 570

  Fly   522 TVGLYYDRYGNIHE-IGPQISSSPRFVAGLQCL--------------NRNSTQYLDERIADIAGL 571
            |.|:..|..|.:.. :.|:  ....:....|||              |.|.|..|:|.:||:.|:
 Worm   571 TAGIKRDENGEVRSWMKPE--DLKEYGKKTQCLVDQYNEYDDPVFGKNLNGTTTLNEMVADMIGV 633

  Fly   572 DLAYSTY--FQNSSQMSLTDFTTIPPQQIFFLNLAQFFCGDGDPINFVG-----HDNDETRLQQM 629
            .:|:..:  ..:|.:..:..|......:::|...|..||......:.|.     |.....|:..:
 Worm   634 TVAWKVFEKLDSSKEQKVIGFENENIDKLYFRAAALDFCSLPPTTSLVEELTRVHPTGNFRVNGI 698

  Fly   630 LNGFAPFHEAFGCPAKS--NQPEKCQLW 655
            .:....|..||.||..|  |...:|.::
 Worm   699 FSNMPQFATAFNCPEGSPMNPKTRCSIF 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl6NP_609023.3 M13 42..653 CDD:189000 142/707 (20%)
nep-6NP_494537.1 M13 105..724 CDD:189000 142/708 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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