DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl6 and nep-12

DIOPT Version :9

Sequence 1:NP_609023.3 Gene:Nepl6 / 33893 FlyBaseID:FBgn0259716 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_001364537.1 Gene:nep-12 / 173824 WormBaseID:WBGene00017842 Length:832 Species:Caenorhabditis elegans


Alignment Length:751 Identity:153/751 - (20%)
Similarity:278/751 - (37%) Gaps:199/751 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 RLMNNILSYVAEDSSACGTYFQYACGKYAVRH---RDDPFTEIIQMLDHKVNGNLVQLMHELHQR 89
            ||..:.|:.:..|::.|..::::||||||.|.   ..:....::..:..:::.:|..::.:..:.
 Worm   158 RLAASYLNNMNRDANPCEDFYEFACGKYATRKVIAEHEKKVTVLSEMKKEMDRHLKDILEKTSRE 222

  Fly    90 SQSPGFNESSVEAKVLHFYRTCREAPPSTRKMEHY----LRLAPPGQALT----WPQFMPRGEPW 146
            :.:.....:.:      ::.:|         |:.:    |.:.|....::    ||  :.....:
 Worm   223 NTTRSMKLAQI------YFDSC---------MDEFSQDDLGVQPLMSMISNLGGWP--LLTNARF 270

  Fly   147 PKAQFKWMKSLGHLYRYGFTNVLVNVLVLRSSENSNRFRLDISMPSLEGDAQHLGGFLS------ 205
            ....|:|....|||..||...:. .|.|..|.::|::..|..|.|.|         ||.      
 Worm   271 DSIDFQWEVLAGHLALYGVDGIF-RVFVHSSFDDSDKNVLMFSPPKL---------FLEKKKFYR 325

  Fly   206 ---------------TLATLQIIGVPTK--------SILPLVRKIRRLESAIRVLTEVDDDDESE 247
                           .|:.|.::||..:        .:..::...||:.:..|:  |:..:..|.
 Worm   326 EVPSSNVYLQYYRQYILSLLSLLGVDMEDETGVIEYQVDDIIDFERRIANLTRI--ELSRNHSSI 388

  Fly   248 TWTLRQWEYKTGY---AWQGFV-ESIVGH--SVSHHYVMQAQNAKYFTGLKRLMDSTDAEVVANY 306
            ...:...|:|..|   .|..|. |.:.|:  .:....|:...:..||..|..|:.|.....:.|:
 Worm   389 NNMITFGEFKRKYDKINWDAFFNEEMRGNLGRMPDSLVINVVDVNYFDNLYSLIKSKPLSSINNF 453

  Fly   307 IM----TRFVLYL-------IDDF------IDSNEHI--DCVTDMRRNMNLASNLLYKERFL--- 349
            :|    :.:.:||       :.||      :.|::.:  .||.::|.|:.:..:..|.::|.   
 Worm   454 LMWCLVSNYDMYLPAKYRKPMLDFRQKMYGVSSDDPLWEVCVGEVRENLAMPLSTEYAQKFFTKK 518

  Fly   350 DPATLQQYTQEVTKVFEQ-----------LRRQFLLQINE--NRLGLTSEQNSMVATKAQHVVLN 401
            |....:...:::.|..||           .|...|::::.  :::|......:..|....:..:.
 Worm   519 DKLVAEDMIRDLKKAMEQTLLNADWIDESTREAALMKLDAMGHKIGFPDSLLNETAVLLPYAGVR 583

  Fly   402 IGNLPRGRDHRSFVSRHYEDLVFPLPDFDYAREHLNLLEFRTRKQVLQLNQSAP--TPDEFFYLS 464
            :            .:..|.|....|....| |:.|:.|. ||...:   :.::|  ..|.|.|.:
 Worm   584 L------------TANQYFDNAISLKKAAY-RDALSKLH-RTPSLI---DWASPIIAVDAFHYFT 631

  Fly   465 DPKTAMSSGPYYLMRLNIIVVPHGLLQEPFFAADSHDIFKYSLLGFVLAHELMHSVDTVGLYYDR 529
            .               |.|:.|.|:||.|.|..|:.....|..:|..:.||:.|..|.:|..||.
 Worm   632 G---------------NEIIFPAGILQFPMFVPDAPAFSNYGAIGMGIGHEITHGYDDLGAQYDD 681

  Fly   530 YGNIH------------------------EIGPQISSSPRFVAGLQCLNRNSTQYLDERIADIAG 570
            .||:.                        :|.||   :.|.|.|...:..|        |||..|
 Worm   682 KGNLRGWWHTETMTTFQKKKQCFVAQYGSKIEPQ---TGRKVDGKMTIGEN--------IADNGG 735

  Fly   571 LDLAYSTYFQNSSQ-------MSLTDFTTIPPQQIFFLNLAQFFCGDGDPINFVGHDNDET---- 624
            |.:|:..|...|.:       ..||||:   |.|:|||..|..:|....| :.:.|..|..    
 Worm   736 LRVAFQAYQLRSDREKETRRLPGLTDFS---PNQLFFLAYANTWCEALKP-SAIDHIMDTDVHSL 796

  Fly   625 ---RLQQMLNGFAPFHEAFGCPAKS--NQPEKCQLW 655
               |:...|.....|.:.|.||..|  |..|||::|
 Worm   797 GMFRVNVPLQNLPAFSKEFDCPIGSPMNPFEKCRIW 832

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl6NP_609023.3 M13 42..653 CDD:189000 147/733 (20%)
nep-12NP_001364537.1 M13 171..830 CDD:341056 147/734 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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