DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl6 and nep-3

DIOPT Version :9

Sequence 1:NP_609023.3 Gene:Nepl6 / 33893 FlyBaseID:FBgn0259716 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_494679.2 Gene:nep-3 / 173730 WormBaseID:WBGene00016778 Length:634 Species:Caenorhabditis elegans


Alignment Length:688 Identity:135/688 - (19%)
Similarity:254/688 - (36%) Gaps:156/688 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 PICAAPTTQNVEADPNSRLMNNILSYVAEDSSACGTYFQYACGKYAVRH-----RDDPFTEIIQM 70
            |:|..|..        ..|::.:|::.......|..::|.|||||...:     |.....:|::.
 Worm    60 PMCLTPEC--------ITLVHQLLNFQDPSVDPCENFYQAACGKYNEHNVIDGSRTAQKQQIVKR 116

  Fly    71 LDHKVNGNLVQLMHELHQRSQSPGFNESSVEAKVLHFYRTCREAPPSTRKM--------EHYLRL 127
            |          :...||:...|...:|:|:  |:|  |..|:||  .|.|:        |.::.:
 Worm   117 L----------IRDFLHKNQSSTSKSENSM--KLL--YEKCKEA--KTIKVLGNQNLLQEIFMNI 165

  Fly   128 APPGQALTWPQFMPRGEPWPKAQFKWMKSLGHLYRYGFTNVLVNVLVLRSSENSNRFRLDISMPS 192
            ...|   :||..   .|.|...:|...:.|..|.|.|.:|.....::: ||:.....:...:.|:
 Worm   166 QKIG---SWPVL---DENWDGKKFNLNEMLLSLIRLGVSNFGFFEIII-SSDAFVEIKPARNFPT 223

  Fly   193 LEGDAQHLGGFLSTLATLQIIGVPTKSILPLVRKIRRLESAIRVLTEVDDDDESETWTLRQWEYK 257
            .|.        ||.:.:...:|   ....|.:             |.:::|       ||::|. 
 Worm   224 REN--------LSDIISKVFLG---NGFQPNI-------------TAIEND-------LREYEN- 256

  Fly   258 TGYAWQGFVESIVGHSVSHHYVMQAQNAKYFTGLKRLMDSTDAEVVANYIMTRFVLYLIDDF--I 320
                                  :|.:    ...|:||:.:|....:.||::..::..::.::  :
 Worm   257 ----------------------LQRE----LKSLERLIQTTPNRSLVNYLIFNYLKSVMLEYKRL 295

  Fly   321 DSNEHIDCVTDMRRNMNLASNLLYKERFLDPATLQQYTQEVTKVFEQLRRQFLLQINENRLGLTS 385
            ...:....|.|.   :..||..::.:.|||    ::..:.|..:.|.::..|:..|.|: ..|..
 Worm   296 PEEQCEGVVIDF---LPRASTRVFVQNFLD----KENRKYVAGMIEDVKMGFIDMIQES-TWLNE 352

  Fly   386 EQNSMVATKAQHVVLNIGNLPRGRDHRSFVSRHYEDLVFPLPDFDYAREHLNLLEFRTRKQVLQL 450
            |...:...|.:::...||               |.|...|....|.:.:.||:.:..:...:::.
 Worm   353 ESKKVAVQKVKNIKSMIG---------------YPDFFEPPGTLDRSFKDLNIEQTDSYHTIVRK 402

  Fly   451 NQSAPTPDEFFYLS-----DPKTAMSSGPYYLMRLNIIVVPHGLLQEPFFAADSHDIFKYSLLGF 510
            .|.........:::     ||:..:.....:....|.:.:...:|.:|.|..........:::|.
 Worm   403 IQKFTNEQCMEFVASEIPLDPRQPILHANAFYQNTNFLAILAPVLDDPIFDTTFPRYVNLAVIGN 467

  Fly   511 VLAHELMHSVDTVGLYYDRYGNIHEIGPQISSSPRFVAGLQCL--------------NRNSTQYL 561
            |||||:.|:.|..|:.||..|. ..|......|..:...|:||              |.|.::.|
 Worm   468 VLAHEIGHAFDHTGINYDDAGQ-QRIWLTPEDSEEYGKRLRCLLRQHDEYDDPDFGRNLNGSKTL 531

  Fly   562 DERIADIAGLDLAYSTY--FQNSSQMSLTDFTTIPPQQIFFLNLAQFFCGDGDPINFV-----GH 619
            .|..||..|::.|:.|:  ...|::..:..|......|::|...|..:|...|..:..     .|
 Worm   532 HEISADRFGVEAAWRTFKKLDLSNESEIVGFQNFNIDQLYFRTAALIWCRQRDTTDLQYALQREH 596

  Fly   620 DNDETRLQQMLNGFAPFHEAFGCPAKS--NQPEKCQLW 655
            ..:..|:..:......|.|.|.||..|  |..:||.|:
 Worm   597 PTNNFRVNGIYANMPQFAETFNCPLGSPMNPKKKCDLF 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl6NP_609023.3 M13 42..653 CDD:189000 128/653 (20%)
nep-3NP_494679.2 M13 82..631 CDD:189000 127/653 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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