DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl6 and nep-10

DIOPT Version :9

Sequence 1:NP_609023.3 Gene:Nepl6 / 33893 FlyBaseID:FBgn0259716 Length:655 Species:Drosophila melanogaster
Sequence 2:NP_494532.2 Gene:nep-10 / 173684 WormBaseID:WBGene00017555 Length:711 Species:Caenorhabditis elegans


Alignment Length:725 Identity:145/725 - (20%)
Similarity:259/725 - (35%) Gaps:167/725 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TQNVEADPN-------SRLMNNILSYVAEDSSACGTYFQYACGKYAVRHRDDPFTEIIQMLDHKV 75
            ||.|:...|       ..|.:.:.:|.......|..::|:.|||:               .:|..
 Worm    67 TQTVDEPRNVCESPECITLAHELHNYKDPSVDPCQDFYQHFCGKF---------------YEHSA 116

  Fly    76 NG---------NLVQLMHELHQRSQSPGFNESSVEAKVLHFYRTCREAPPSTRKMEHYLRLAPPG 131
            .|         .|.:|:.|...::::   :.|..|..:...|..|||    .:|:.. |...|| 
 Worm   117 IGQGRMATKRSTLSKLIREFLLKNKT---STSKSENTMKQVYAKCRE----LQKISD-LNSIPP- 172

  Fly   132 QAL-----------TWPQFMPRGEPWPKAQFKWMKSLGHLYRYGFTN-------------VLV-- 170
            |||           .||..   .:.|..::|...:.|..|...|.|:             ||:  
 Worm   173 QALLDIFSDIKKIGAWPVL---DKDWDGSKFNLNEMLRQLVNLGETHLGFFHFDFIARPYVLIKP 234

  Fly   171 --------NVL--VLRSSENSNRFRLDISMPSLEGDAQHLGGFLSTLATLQIIGVP--TKSILPL 223
                    :||  |::....:|..::|      :|.::.|..:......::|..:|  ::||:.|
 Worm   235 PLKQGVQKSVLEKVVKMILEANEIKMD------QGFSEDLDEYFELSNRIKIDKLPRTSRSIVGL 293

  Fly   224 VRKIRRLESAIRVLTEVDDDDESETWTLRQWEYKTGYAWQGFVESIVGHSVSHHYVMQAQNAKYF 288
            :..:||:.....:|                 |.........|:.::....|::|:.:..::.: .
 Worm   294 LPDVRRINFRGLIL-----------------EMMPRSKMNRFLGTLFQKVVTYHHPLFVRDNE-T 340

  Fly   289 TGLKRLMDSTDAEVVANYIMTRFVLYLID--DFIDSNEHIDCVTDMRRNMNLASNLLYKERFLDP 351
            ..|..::.||....:|||::..|:...|.  .|...::...|...:.:.:...|..::....:|.
 Worm   341 NHLDTIIRSTSNRALANYLIFNFIHSSIKFLTFGLKSDRERCEKIVVQELPRPSLRVFMRNCVDK 405

  Fly   352 ATLQQYTQEVTKVFEQLRRQFLLQINENRLGLTSEQNSMVATKAQHVVLNIGNLPRGRDHRSFVS 416
            ..    .:||.|:.|.::...|..|.|:. ..|......|..|.:.:...|| .|...|....:.
 Worm   406 GN----REEVAKLTETVKENVLEMIRESD-SFTPSVKKRVLKKVEAIGAIIG-YPDHFDPPGTLD 464

  Fly   417 RHYEDLVFPLPDFDYAREHLNLLEFRTRKQVLQLNQSAPTPDEFFYLSDPKTAMSSGPYYLMRLN 481
            :.||:|.....| .|.:....|.:.|.:.|:..|....|       ||.....:....:|..:.|
 Worm   465 KEYENLTLDASD-SYYKMSQKLHQLRLQHQMEFLAGQTP-------LSPSDQVLEVNAHYDSKDN 521

  Fly   482 IIVVPHGLLQEPFFAADSHDIFKYSLLGFVLAHELMHSVDTVGLYYD---RYGNIHEIGPQISSS 543
            .:.|....|.:|||.:...:.......||::.||..||:|...|..|   :..::.|.|.:    
 Worm   522 ALTVLAPFLDDPFFDSTYPEYVNLIFTGFLIGHEFGHSIDPKILRRDGWYKTEDMTEYGKR---- 582

  Fly   544 PRFVAGLQCL--------------NRNSTQYLDERIADIAGLDLAYSTY--FQNSSQMSLTDFTT 592
                  .|||              ..|.|..:.|.:.|..|.|:.:..:  ...|....|..|..
 Worm   583 ------AQCLIDQYDNYDDPDHGKQMNGTYCIGEIVGDWVGRDVTWRAFKKMDLSKMQKLIGFED 641

  Fly   593 IPPQQIFFLNLAQFFCGD----------GDPINFVGHDNDETRLQQMLNGFAPFHEAFGCPAKS- 646
            ....|::|...:.||||.          .||     |..:..|:..:.:....|.:||.||..| 
 Worm   642 KNLDQLYFRIQSLFFCGPRSMKSLEQLLSDP-----HPTEVFRVNGIYSNMPQFAKAFNCPIGSP 701

  Fly   647 -NQPEKCQLW 655
             |..:||:::
 Worm   702 MNPEKKCKMF 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl6NP_609023.3 M13 42..653 CDD:189000 138/690 (20%)
nep-10NP_494532.2 M13 97..709 CDD:189000 138/691 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

Return to query results.
Submit another query.