DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl5 and Mmel1

DIOPT Version :10

Sequence 1:NP_609022.1 Gene:Nepl5 / 33892 FlyBaseID:FBgn0031808 Length:684 Species:Drosophila melanogaster
Sequence 2:NP_001101467.2 Gene:Mmel1 / 313755 RGDID:1309299 Length:774 Species:Rattus norvegicus


Alignment Length:785 Identity:184/785 - (23%)
Similarity:305/785 - (38%) Gaps:214/785 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TTPTACRQTNAPQSVQEMLAEQLQSYMDTKARPCENFYQYACGNWQIQQQEQHSLRDRDWTRDRQ 82
            |||:..           :.|.::...||...:||:||||||||.|         ||.........
  Rat    86 TTPSCV-----------IAAARILQNMDQSKKPCDNFYQYACGGW---------LRHHVIPETNS 130

  Fly    83 RYQGQMLPTDTLGLIDHSVNRKLELLLRRRNESSFESDSSILEQMRLYYRSCKR---LKPYNLKK 144
            ||.           :...:..:||::|:...|.|.......:|:.:..||||..   ::..:.:.
  Rat   131 RYS-----------VFDILRDELEVILKGVLEDSSVQHRPAVEKAKTLYRSCMNQSVIEKRDSEP 184

  Fly   145 YLQLLPPSNSTQWPSVGRGWRPERFDWITTLG-----RLRLHGLNGVLLREEVLPR--WDDSRNY 202
            .|.:|        ..:| ||......|..|:|     ..:|..||....|..::..  |:|.:|.
  Rat   185 LLNVL--------DMIG-GWPVAMDKWNETMGPKWELERQLAVLNSQFNRRVLIDLFIWNDDQNS 240

  Fly   203 S---IYVNKPS----------RQETQPMGEGAMIELLLDI-----------GQT----------- 232
            |   ||:::|:          ::::..:.| |.::.:..:           |:|           
  Rat   241 SRHVIYIDQPTLGMPSREYYFKEDSHRVRE-AYLQFMTSVATMLRRDLNLPGETDLVQEEMAQVL 304

  Fly   233 ---KRTANALARQV--DDFERKLHR--LQELEDDEGPREMQLGYLDSYLPQLRWLSFMRQVRIDS 290
               ...|||...|.  .|.....||  |:||::..|            |....|..|::.|....
  Rat   305 HLETHLANATVPQEKRHDVTALYHRMGLEELQERFG------------LKGFNWTLFIQNVLSSV 357

  Fly   291 ELDL--RSTLIIENIPYLRALSDLMESESPDTVCSYIMLKWLAFLKQQGP--------------- 338
            :::|  ...:::..||||..|.::::.....|:.:|::  |...|.:.|.               
  Rat   358 QVELLPNEEVVVYGIPYLENLEEIIDVFPAQTLQNYLV--WRLVLDRIGSLSQRFKEARVDYRKA 420

  Fly   339 ------ADISRGECVAALRRAMPLASSWLVGQQFSDPESESYVSSLFQRLKVRFGQIL------- 390
                  .::...|||:.:...|..|...|..::....:|:|.||.|.::::..|...|       
  Rat   421 LYGTTMEEVRWRECVSYVNSNMESAVGSLYIKRAFSKDSKSIVSELIEKIRSVFVDNLDELNWMD 485

  Fly   391 AENRMRLSPPLVHILQQKLRAVRLQMGFFQTEEIEDVEQYHVRIDLSGHSFYGNQLVLLRQRVEA 455
            .|::.:        .|:|...:|.|:|:  .:.|.:....|:..:.|..:|              
  Rat   486 EESKKK--------AQEKALNIREQIGY--PDYILEDNNRHLDEEYSSLTF-------------- 526

  Fly   456 NHDLLYIN-VTNFANSTGSNLSYLSES-----W--EASNSSPLYVRPRNLVLVPHGLLQLPIWHR 512
            :.||.:.| :.|..|:...:|..|.|.     |  .|:..:..|...|||::.|.|:||.|.:.:
  Rat   527 SEDLYFENGLQNLKNNAQRSLKKLREKVDQNLWIIGAAVVNAFYSPNRNLIVFPAGILQPPFFSK 591

  Fly   513 NISALQQHAVMGFVLAHELAHGFDMLGMDYDAMGNIMGPVEEIGASRQFRQGLQCL--------- 568
            :.........:|.|:.||:.||||..|.::|..||::.......| |.|||..||:         
  Rat   592 DQPQALNFGGIGMVIGHEITHGFDDNGRNFDKNGNMLDWWSNFSA-RHFRQQSQCMIYQYSNFSW 655

  Fly   569 ---QQQMATGSKWIDEKLADFVALRLAYETFF-----GVRDKREPRDPLLPQFSQRQLFFITFAQ 625
               ..|...|...:.|.:||...:|.||:.:.     |.||:|.|...|    :..|||||.:||
  Rat   656 ELADNQNVNGFSTLGENIADNGGVRQAYKAYLQWLAEGGRDQRLPGLNL----TYAQLFFINYAQ 716

  Fly   626 FFCG-----------RTPVLSPRSQSEAHLKHAADELRVMQTLANFEEFSREFGCDKKAKMQASQ 679
            .:||           :|.|.||       ||:     ||:.:|.|...||..|.|.:.:.|....
  Rat   717 VWCGSYRPEFAIQSIKTDVHSP-------LKY-----RVLGSLQNLPGFSEAFHCPRGSPMHPMN 769

  Fly   680 RCRIW 684
            |||||
  Rat   770 RCRIW 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl5NP_609022.1 M13 48..682 CDD:341056 174/751 (23%)
Mmel1NP_001101467.2 Stop-transfer sequence. /evidence=ECO:0000255 14..21
M13 106..772 CDD:341056 174/750 (23%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.