DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl4 and goe

DIOPT Version :9

Sequence 1:NP_609019.1 Gene:Nepl4 / 33889 FlyBaseID:FBgn0031805 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001285350.1 Gene:goe / 32660 FlyBaseID:FBgn0027528 Length:879 Species:Drosophila melanogaster


Alignment Length:674 Identity:126/674 - (18%)
Similarity:241/674 - (35%) Gaps:205/674 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ECNSTINQQHIDTLMSYVDSEKNPCEDFYAYACGKWRAKHGSHTTATMISESQIN----RQYEDL 97
            ||..:..|     |:.:.::.|:||.:.|.:|||.:.:.:.:| ...:|...:.|    .:|::|
  Fly   167 ECVESSRQ-----LLLWANTSKSPCHETYEWACGNFASDYANH-EYFVIKRGEWNYETYNEYQEL 225

  Fly    98 -----FLQLLRNPSAPEYGYPMFAKVLAHYQSCIALEKPDLRRYIELLDR---DLLAS------- 147
                 |:.:|  |::.|..  :.:.|.:.|:||         |..::||:   |||..       
  Fly   226 NELNRFIAML--PNSQEGS--VESTVSSLYRSC---------RETDVLDKSQSDLLLKRAINAVY 277

  Fly   148 ----------LNSTHWMHLLAAL-GRYGYHGHY-VQVEVRWYNATHHMIFL------LPHNRHLN 194
                      |.|..:..:|..| .::|...:| |.||..:.|...::|.|      ||......
  Fly   278 GWQAFRDSNRLQSWEYKRVLVVLQAKHGIFPYYRVTVENGFSNPHDYVITLDEGELGLPDKYFYG 342

  Fly   195 LSLTQDI---YDALSQDGSSWPPLHQLQEQFRSLEQNLVRLAKPHSADDTFRNYSLDQIRTEVPG 256
            ....:::   |..|.:|              .::...:|.......|||.| :|....:.     
  Fly   343 NDADEEVVRGYKLLLRD--------------FAINMGIVSREADLFADDIF-HYERRIVN----- 387

  Fly   257 LHWDEALRTQLGRSVPGNHVFQVDD----------LDAIEGLVEYLN-TVDTLLLNR-----YSL 305
             |.::| :....|  |.|.:.::.|          |::::.:..... |.||.:|.|     ::|
  Fly   388 -HIEDA-KADANR--PINKLMRLADLKIKAPSLPILESLQAIFPKTKITEDTEVLVRDPEVMHAL 448

  Fly   306 ARFLSHLLELPHNPLATWESGQRSRGRNCIRHMRRSVYLPMNYVYERSFYSR------------- 357
            :..||...:.|.|....|     |..|..:.|:.:. |..:...::.:.|.|             
  Fly   449 SVLLSTSDKKPINNFIVW-----SLARKMLPHLSKE-YRTLAETFDHALYGRTASYPRWLICSKV 507

  Fly   358 --------------------------------RRHADELVIHSVFQQLQSQLELRVQHNAFNLSQ 390
                                            :...:|.::..:|..|::||:..::...: |..
  Fly   508 VRDWLPFAVDALQQQPPRQQFETMTSKSRGLNKTQGNEELLKLMFFSLRNQLKDSLEQAKW-LEP 571

  Fly   391 DLVKSLQAKVHQMRINVGNLPPNVTEQ-----------------FYWDSDRRWSVGRDFYENHLN 438
            ...:.:|.|:::||:..| :|..|.:|                 |....:..|:..|...|..|.
  Fly   572 AARQFIQKKLNEMRLQFG-IPDEVLQQPTYLAQYYNELILNNVFFVEHLEWIWTFRRSQMEKKLG 635

  Fly   439 SLLYYYTLVADLESSSDQEERDIWYSFNMHTPEFPDNIDATPYFYCLGNIIFVPYSYVKRPFFDA 503
            .|.....:|::                 |:|   .||..|..|...| |::.|....:...::|.
  Fly   636 PLAILDVIVSE-----------------MYT---RDNPQAIAYSNKL-NMLLVSKVLISSNYYDY 679

  Fly   504 NFWPALLYGDLANTLGHEIMHAFDTDLVDYDAQGNLRNFSDQLGEVELYNGAVGCLNSS-----A 563
            .:..|:.:..:...:...::..|.|.|:.::.|..  :.||...|:......|.||.:.     .
  Fly   680 RYPVAVNFARIGTDILEALIDNFSTFLLQFNTQST--DISDAAPEIRYAQPDVNCLAAGQPPRLV 742

  Fly   564 VMLNERTSD--------VSGSRLA 579
            ..|||.:|:        :|.:|.|
  Fly   743 HELNELSSNALKSFHVTLSAARTA 766

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl4NP_609019.1 PepO 51..643 CDD:226118 122/660 (18%)
GluZincin 59..649 CDD:301352 121/652 (19%)
goeNP_001285350.1 GluZincin 184..>694 CDD:301352 104/576 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.910

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