DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl4 and frma

DIOPT Version :10

Sequence 1:NP_609019.1 Gene:Nepl4 / 33889 FlyBaseID:FBgn0031805 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster


Alignment Length:637 Identity:146/637 - (22%)
Similarity:256/637 - (40%) Gaps:117/637 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 EKNPCEDFYAYACGKWRAKHGSHTTATMISESQINRQYEDLFLQLLRNPSAPEYGYPMFAKVLAH 121
            :.:||::||..|||.|.|.|.:.:..:.:.....|  |::....||.|..  |...|.|.:.|.:
  Fly    24 QADPCQNFYKVACGNWSASHATDSYESFMDRLDYN--YQEKLADLLDNER--EDDEPHFLQQLRN 84

  Fly   122 -YQSC-IALEKPDLRRYIELL-------DRDLLASLNSTHWMHLLAALGRYGYHGHYVQVEVRWY 177
             |.:| ..|.:..:.|.:|.|       :.:|...|.:...:.:|..|.....:..:.|      
  Fly    85 FYTACRKPLSQDQVLRILEHLIVMENIQNEELSVGLTAAFRLQVLIDLNDSNTYDIWKQ------ 143

  Fly   178 NATHHMIFLLPHNRHLNLS------LTQDIYDALSQDGSSWPPLHQLQEQFR--------SLEQN 228
                    |:.|.:|.:.:      ||::::|.|      |..|.::...|:        .||:.
  Fly   144 --------LMSHRKHWDPNTTNREPLTREMFDKL------WASLPKIPFPFKEYYWRELSELEEK 194

  Fly   229 LVRLAKPHSADDTFRNYSLDQIRTEVPG---LHWDEALRTQLGRSVPGNHVFQVDDLDAIEGLVE 290
            ::...   |.||.|.:   ..:.|.:|.   :.|..           ||..:        |.|.:
  Fly   195 IMSYG---SEDDGFDS---GDLVTRIPPFWMMPWPN-----------GNITY--------ENLSQ 234

  Fly   291 YLNTVDTLLLNRYSLARFLSHLLELPHNPLATWESGQRSRGRNCIRHMRRSVYLPMNYVYERSFY 355
            ..:.:| :..|.:.|. ::...|:|....::| ||....|.: |....|:.:..|..::.|:   
  Fly   235 MAHWLD-IKANEFILT-YIYMRLKLVAEGVST-ESWHIDRDQ-CAEQSRQILSHPAAWLVEK--- 292

  Fly   356 SRRRHADELVIHSVFQQLQSQLELRVQHNAFNLSQDLVKSLQAKVHQMRINVGNLPPNVTEQFYW 420
            :..|..:|.|:..:|.:|:.:...::..|..|.::.....|..|:.:||:.:..||.|.:.|   
  Fly   293 NHPRLKEEPVLQDIFAELKQRFGQKLLANRNNFTRSTQHFLLGKLKRMRLRLSILPRNSSAQ--- 354

  Fly   421 DSDRRWSVGRDFYENHLNSLLYYYTLVADL-ESSSDQEERDIWY---------SFNMHTPEFPDN 475
            ...||  :.|.:.:.|:|:..|:..|...| .|.|.::...:|.         |....:..:|..
  Fly   355 SMVRR--IERHYRDVHMNASDYFGNLHIGLNHSRSHKKYAQLWAIVFGRQLIPSRISKSDLYPTQ 417

  Fly   476 ID-----ATPYFYCLGNIIFVPYSYVKRPFFDANFWPALLYGDLANTLGHEIMHAFDTDLVDYDA 535
            :.     |:.::....|::.||.|.::.||:.......|.|..|...||||:.|.||::.:.:.:
  Fly   418 VRGYGTYASAFYIVKQNMLIVPLSLLEPPFYTHGQPSILTYSALGFILGHELSHGFDSEGMTFSS 482

  Fly   536 QGNLRNFSD-QLGEVELYNGAVGCLNSS-AVMLNERTSDVSGSRLAMQTYGGDWLTRSGNGR--- 595
            .|...:..| :|.....:...:|||... .....|:.:|.||..||...|.....|.....|   
  Fly   483 HGVGSSAVDRELDRNPRFQQELGCLRRRFGRKRYEKFADASGLELAYSAYFDTAQTDHKRNRSAE 547

  Fly   596 -------LYFLQFAHFFCGD-EGDQYHDSGS--QRLNYALGQVPQFAEVFRC 637
                   .:|..||.|||.| |..|.||.||  :|:|.|:.....|.|.|.|
  Fly   548 ELVTQKQQFFHNFAQFFCSDKELLQAHDHGSDRKRVNDAVAHFEPFREAFSC 599

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl4NP_609019.1 GluZincin 59..649 CDD:472708 146/635 (23%)
frmaNP_572226.2 GluZincin 25..601 CDD:472708 146/636 (23%)

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