DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl4 and Mmel1

DIOPT Version :9

Sequence 1:NP_609019.1 Gene:Nepl4 / 33889 FlyBaseID:FBgn0031805 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001101467.2 Gene:Mmel1 / 313755 RGDID:1309299 Length:774 Species:Rattus norvegicus


Alignment Length:732 Identity:151/732 - (20%)
Similarity:260/732 - (35%) Gaps:183/732 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 LMSYVDSEKNPCEDFYAYACGKWRAKHGSHTTATMISESQINRQYEDLFLQLLRNPSAPEYGYPM 114
            ::..:|..|.||::||.||||.|...|....|.:..|...|.|...::.|:.:...|:.:: .|.
  Rat    97 ILQNMDQSKKPCDNFYQYACGGWLRHHVIPETNSRYSVFDILRDELEVILKGVLEDSSVQH-RPA 160

  Fly   115 FAKVLAHYQSCI---ALEKPDLRRYIELLD----------------------RDLLASLNSTHWM 154
            ..|....|:||:   .:||.|....:.:||                      ...||.|||....
  Rat   161 VEKAKTLYRSCMNQSVIEKRDSEPLLNVLDMIGGWPVAMDKWNETMGPKWELERQLAVLNSQFNR 225

  Fly   155 HLLAALGRYGYHGHYVQVEVRW---YNATHHMIFL------LPHN-----------RHLNLSLTQ 199
            .:|..|        ::     |   .|::.|:|::      :|..           |...|....
  Rat   226 RVLIDL--------FI-----WNDDQNSSRHVIYIDQPTLGMPSREYYFKEDSHRVREAYLQFMT 277

  Fly   200 DIYDALSQDGSSWPPLHQLQE---QFRSLEQNLVRLAKP----HSADDTFRNYSLDQI--RTEVP 255
            .:...|.:|.:.......:||   |...||.:|.....|    |.....:....|:::  |..:.
  Rat   278 SVATMLRRDLNLPGETDLVQEEMAQVLHLETHLANATVPQEKRHDVTALYHRMGLEELQERFGLK 342

  Fly   256 GLHWDEALRTQLG----RSVPGNHVFQVDDLDAIEGLVEYLNTVDTLLLNRYSLARFLSHLL--- 313
            |.:|...::..|.    ..:|...|. |..:..:|.|.|.::......|..|.:.|.:...:   
  Rat   343 GFNWTLFIQNVLSSVQVELLPNEEVV-VYGIPYLENLEEIIDVFPAQTLQNYLVWRLVLDRIGSL 406

  Fly   314 -------ELPHNPLATWESGQRSRGRNCIRHMRRSVYLPMNYVYERSFYSR--RRHADELV--IH 367
                   .:.:.......:.:..|.|.|:.::..::...:..:|.:..:|:  :....||:  |.
  Rat   407 SQRFKEARVDYRKALYGTTMEEVRWRECVSYVNSNMESAVGSLYIKRAFSKDSKSIVSELIEKIR 471

  Fly   368 SVFQQLQSQLELRVQHNAFNLSQDLVKSLQAKVHQMRINVGNLPPNVTEQFYWDSDRRWS---VG 429
            |||.....:|..        :.::..|..|.|...:|..:| .|..:.|......|..:|   ..
  Rat   472 SVFVDNLDELNW--------MDEESKKKAQEKALNIREQIG-YPDYILEDNNRHLDEEYSSLTFS 527

  Fly   430 RDFY-ENHLNSLLYYYTLVADLESSSDQEERDIW----------YSFNMHTPEFPDNIDATPYFY 483
            .|.| ||.|.:|  .......|:...::.::::|          ||.|.                
  Rat   528 EDLYFENGLQNL--KNNAQRSLKKLREKVDQNLWIIGAAVVNAFYSPNR---------------- 574

  Fly   484 CLGNIIFVPYSYVKRPFFDANFWPALLYGDLANTLGHEIMHAFDTDLVDYDAQGNL--------- 539
               |:|..|...::.|||..:...||.:|.:...:||||.|.||.:..::|..||:         
  Rat   575 ---NLIVFPAGILQPPFFSKDQPQALNFGGIGMVIGHEITHGFDDNGRNFDKNGNMLDWWSNFSA 636

  Fly   540 --------------RNFSDQLGEVELYNGAVGCLNSSAVMLNERTSDVSGSRLAMQTYGGDWLTR 590
                          .|||.:|.:.:..||        ...|.|..:|..|.|.|.:.| ..||..
  Rat   637 RHFRQQSQCMIYQYSNFSWELADNQNVNG--------FSTLGENIADNGGVRQAYKAY-LQWLAE 692

  Fly   591 SGN-----------GRLYFLQFAHFFCGDEGDQY---------HDSGSQRLNYALGQVPQFAEVF 635
            .|.           .:|:|:.:|..:||....::         |.....|:..:|..:|.|:|.|
  Rat   693 GGRDQRLPGLNLTYAQLFFINYAQVWCGSYRPEFAIQSIKTDVHSPLKYRVLGSLQNLPGFSEAF 757

  Fly   636 RCHVGSGMTSADQCPFW 652
            .|..||.|...::|..|
  Rat   758 HCPRGSPMHPMNRCRIW 774

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl4NP_609019.1 PepO 51..643 CDD:226118 148/720 (21%)
GluZincin 59..649 CDD:301352 147/718 (20%)
Mmel1NP_001101467.2 Stop-transfer sequence. /evidence=ECO:0000255 14..21
M13 106..772 CDD:341056 147/719 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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