DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl4 and nep-3

DIOPT Version :9

Sequence 1:NP_609019.1 Gene:Nepl4 / 33889 FlyBaseID:FBgn0031805 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_494679.2 Gene:nep-3 / 173730 WormBaseID:WBGene00016778 Length:634 Species:Caenorhabditis elegans


Alignment Length:736 Identity:152/736 - (20%)
Similarity:255/736 - (34%) Gaps:229/736 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 LLLLGSATCGSSVPVKAND---------PEQSCPYLGECNSTINQQHIDTLMSYVDSEKNPCEDF 64
            :|||.:...|..|....::         |:..| ...||.:.::|     |:::.|...:|||:|
 Worm    30 VLLLEAGKIGGEVSENCSNHSTSSASPKPKPMC-LTPECITLVHQ-----LLNFQDPSVDPCENF 88

  Fly    65 YAYACGKWRAKH---GSHTTATMISESQINRQYEDLFLQLLRNPSAPEYGYPMFAKVLAHYQSCI 126
            |..||||:...:   ||.|.           |.:.:..:|:|                       
 Worm    89 YQAACGKYNEHNVIDGSRTA-----------QKQQIVKRLIR----------------------- 119

  Fly   127 ALEKPDLRRYIELLDRDLLASLNSTHWMHLL----------AALGRYGYHGHYVQVEVRWYNATH 181
                       :.|.::..::..|.:.|.||          ..||                    
 Worm   120 -----------DFLHKNQSSTSKSENSMKLLYEKCKEAKTIKVLG-------------------- 153

  Fly   182 HMIFLLPHNRHLNLSLTQDIYDALSQDGSSWPPLHQ--------LQEQFRSLEQNLVRLAKPH-- 236
                        |.:|.|:|:..:.:.| |||.|.:        |.|...|    |:||...:  
 Worm   154 ------------NQNLLQEIFMNIQKIG-SWPVLDENWDGKKFNLNEMLLS----LIRLGVSNFG 201

  Fly   237 -----SADDTF------RNY----SLDQIRTEVPGLHWDEALRTQLGRSVPGNHVFQVDDLDAIE 286
                 .:.|.|      ||:    :|..|.::|           .||.....|.....:||...|
 Worm   202 FFEIIISSDAFVEIKPARNFPTRENLSDIISKV-----------FLGNGFQPNITAIENDLREYE 255

  Fly   287 GLVEYLNTVDTLLL---NRYSLARFL------SHLLELPHNPLATWESGQRSRGRNCIRHMRRSV 342
            .|...|.:::.|:.   || ||..:|      |.:||....|....|.....             
 Worm   256 NLQRELKSLERLIQTTPNR-SLVNYLIFNYLKSVMLEYKRLPEEQCEGVVID------------- 306

  Fly   343 YLP--MNYVYERSFYSRRRHADELVIHSVFQQLQSQLELRVQHNAFNLSQDLVKSLQAKVHQMRI 405
            :||  ...|:.::|..:.   :...:..:.:.::......:|.:.: |:::..|....||..::.
 Worm   307 FLPRASTRVFVQNFLDKE---NRKYVAGMIEDVKMGFIDMIQESTW-LNEESKKVAVQKVKNIKS 367

  Fly   406 NVGN----LPPNVTEQFYWDSDRRWSVGRDFYENHLNSLLYYYTLVADLESSSDQEERDIWYSFN 466
            .:|.    .||.             ::.|.|.:.::.....|:|:|..::..::::..:...|..
 Worm   368 MIGYPDFFEPPG-------------TLDRSFKDLNIEQTDSYHTIVRKIQKFTNEQCMEFVASEI 419

  Fly   467 MHTPEFPDNIDATPYFYCLGNIIFVPYSYVKRPFFDANFWPALLYGDLANTLGHEIMHAFDTDLV 531
            ...|..|  |.....||...|.:.:....:..|.||..|...:....:.|.|.|||.||||...:
 Worm   420 PLDPRQP--ILHANAFYQNTNFLAILAPVLDDPIFDTTFPRYVNLAVIGNVLAHEIGHAFDHTGI 482

  Fly   532 DYDAQGNLRNFSDQLGEVELYNGAVGC----------------LNSSAVMLNERTSDVSGSRLAM 580
            :||..|..|.:... .:.|.|...:.|                ||.|.. |:|.::|..|...|.
 Worm   483 NYDDAGQQRIWLTP-EDSEEYGKRLRCLLRQHDEYDDPDFGRNLNGSKT-LHEISADRFGVEAAW 545

  Fly   581 QTYGGDWLTRSGN---------GRLYFLQFAHFFC--GDEGD-QY-----HDSGSQRLNYALGQV 628
            :|:....|:....         .:|||...|..:|  .|..| ||     |.:.:.|:|.....:
 Worm   546 RTFKKLDLSNESEIVGFQNFNIDQLYFRTAALIWCRQRDTTDLQYALQREHPTNNFRVNGIYANM 610

  Fly   629 PQFAEVFRCHVGSGMTSADQC 649
            |||||.|.|.:||.|....:|
 Worm   611 PQFAETFNCPLGSPMNPKKKC 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl4NP_609019.1 PepO 51..643 CDD:226118 139/677 (21%)
GluZincin 59..649 CDD:301352 139/675 (21%)
nep-3NP_494679.2 M13 82..631 CDD:189000 139/676 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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