DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nepl4 and ecel1

DIOPT Version :9

Sequence 1:NP_609019.1 Gene:Nepl4 / 33889 FlyBaseID:FBgn0031805 Length:652 Species:Drosophila melanogaster
Sequence 2:XP_012818808.2 Gene:ecel1 / 100496473 XenbaseID:XB-GENE-989944 Length:764 Species:Xenopus tropicalis


Alignment Length:698 Identity:147/698 - (21%)
Similarity:263/698 - (37%) Gaps:141/698 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 VDSEKNPCEDFYAYACGKWRAKHGSHTTATMISESQ--------INRQYEDLFLQLLRNPSAPEY 110
            :|...:||.|||::|||.|..:||       |.|.:        |..|.|:....||..|...::
 Frog   109 IDPTISPCTDFYSFACGGWLRRHG-------IPEDKLIYGTIAAIGEQNEEKLEHLLLQPVRRKH 166

  Fly   111 GYPMFAKVLAHYQSCIALEKPDLRRYIELLDRDLLASLNS-----------THW--MHLLAALGR 162
            ......||...::||:     ::|....|..|.:|..:..           |.|  ..||     
 Frog   167 KGSAERKVKEFFKSCL-----NMRDIDRLGARPMLQVIEDCGGWDLPEDPRTQWDFNELL----- 221

  Fly   163 YGYHGHY-------VQVEVRWYNATHHMI------FLLPHNRHLNLSLTQD--------IYDALS 206
            |...|.|       :.|.:...|::.::|      ..||..   .|.|.||        .|....
 Frog   222 YKTQGVYSTAVFFSMTVSLDDKNSSRYIIRIDQDGLTLPER---TLYLGQDEESIKVLEAYKVFM 283

  Fly   207 QDGSSWPPLHQLQ---EQFRSLEQNLVRLAKPHSADDTFRNYS-------LDQIRTEVPGLHWDE 261
            |...|...:..:|   |:...|||:|..:. ....||..|:.|       |.|::...|.|:|..
 Frog   284 QTILSLLGVENVQKKAEEILHLEQHLSNIT-ISEFDDMRRDISTMYNKVTLAQLQQITPHLNWKN 347

  Fly   262 ALRTQLGRSVPGNHVFQVDDLDAIEGLVEYLNTVDTLLLNRYSLARFLSHLLELPHNPL--ATWE 324
            .|......:.|.:....|...|.::.:.|.:.:....:|:.|.|.|.:..|.|....|.  |..|
 Frog   348 LLNRIFHTNFPEDEEVVVLATDYMQKVSEMIRSTPASVLHNYMLWRIVVVLSEHLSTPFRDAIHE 412

  Fly   325 SGQRSRG--------RNCIRHMRRSVYLPMNYVYERSFYSRRRHADELVIHSVFQQLQSQLELRV 381
            ..:...|        :.|:....:...:.:..::...::|....|.   :..:.:.::..|:.|:
 Frog   413 LSKEMEGSEKQAELTKVCLTQANKHFGMALGALFVEEYFSSSSKAK---VQQLVENIKHILDYRL 474

  Fly   382 QHNAFNLSQDLVKSLQAKVHQMRINVGNLPPNVTEQFYWDSDRRWSVG-RDFYENHLNSLLYYYT 445
            :...: :..:..::.:.|:..|.:.:| .|..:.:....|.:..:.|. :.:::|.|||:  .|:
 Frog   475 EELDW-MDTETKQAAREKLKHMMVMIG-YPDVLLQPESMDKEYEFEVNEKTYFKNILNSI--RYS 535

  Fly   446 LVADLESSSDQEERDIWYSFNMHTPEFPDNIDATPYFYCLGNIIFVPYSYVKRPFFDANFWPALL 510
            :...:.....:.::..|.     .|  |..::|  |:....|.:..|...::...:|.:|..:|.
 Frog   536 IKMAVRRIRQEVDKSAWL-----LP--PQALNA--YYLPNKNQMVFPAGILQPTLYDPDFPQSLN 591

  Fly   511 YGDLANTLGHEIMHAFDTDLVDYDAQGN------LRNFSDQLGEVE----------LYNGAVGCL 559
            ||.:...:|||:.|.:|.....|||.||      ..::|..|.:.|          :||..|   
 Frog   592 YGGIGTIIGHELTHGYDDWGGQYDANGNPIQWWTEDSYSKFLKKAECIVDLYENFTVYNQRV--- 653

  Fly   560 NSSAVMLNERTSDVSGSRLAMQTYGGDWLTRSG-----------NGRLYFLQFAHFFCGDEGDQ- 612
             :....|.|..:|:.|.:||...| ..|:..:|           :.:|:|:.||..:|.....| 
 Frog   654 -NGRTTLGENIADLGGLKLAYYAY-QKWVRDNGPERPLPRLKYTHDQLFFIAFAQNWCIKRRSQS 716

  Fly   613 --------YHDSGSQRLNYALGQVPQFAEVFRCHVGSGMTSADQCPFW 652
                    .|.....|:..::.|..:|..||.|...|.|....:|..|
 Frog   717 IYLQVLTDKHAPEHYRVMGSVSQFEEFGRVFHCPRNSPMNPVHKCSVW 764

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl4NP_609019.1 PepO 51..643 CDD:226118 144/687 (21%)
GluZincin 59..649 CDD:301352 144/688 (21%)
ecel1XP_012818808.2 M13 113..762 CDD:341056 144/690 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D282463at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

Return to query results.
Submit another query.