Protein Alignment CG9500 and Fcna

DIOPT Version :10

• Sequence 1: NP_609018.3
• Gene: CG9500 / 33888
• FlyBaseID: FBgn0031804
• Length: 292
• Species: Drosophila melanogaster
• Sequence 2: NP_112638.2
• Gene: Fcna / 83517
• RGDID: 621221
• Length: 335
• Species: Rattus norvegicus
• Alignment Length: 225
• Identity: 91/225 - (40%)
• Similarity: 122/225 - (54%)
• Gaps: 17/225 - (7%)

  Fly    63 KSSSDLNTTGLSGRYPSQCPTYPPAHGIYTVQVLGLKPFQVSCDAEIAGTGWTVMARRTSNKLNF 127
            :|..||.|.|:.            ..|.||:.:...:|..|.||.::.|.||||..||....:||
  Rat   124 RSCKDLLTRGIF------------LTGWYTIYLPDCRPLTVLCDMDVDGGGWTVFQRRVDGSINF 176

  Fly   128 FRSWAEYKNGFGQLDGDFFIGLDKLHAITKSQPHELYIHLEDFEGQTRYAHYDEIFIESENKFYA 192
            :|.|..||.|||.|..:|::|.|.||.:|.:...||.:.|.:|:|||.:|.|....:..|.:.|.
  Rat   177 YRDWDSYKRGFGNLGTEFWLGNDYLHLLTANGNQELRVDLREFQGQTSFAKYSSFQVSGEQEKYK 241

  Fly   193 MTKLGEF-TGDAGDSMIHNRNQNFSTFDRDND-GWHKNCAEEYVGAWWHLNCTYSNLFGIYVKGD 255
            :| ||:| .|.||||:..:.|..|||.|:||| ...||||..:.||||:.:|..|||.|.|:.|.
  Rat   242 LT-LGQFLEGTAGDSLTKHNNMAFSTHDQDNDTNGGKNCAALFHGAWWYHDCHQSNLNGRYLPGS 305

  Fly   256 EGQYFQWKGIVWHSWRTESYSYKVMQMMVR 285
            ...|..  ||.|.|.|...|||||.:|.:|
  Rat   306 HESYAD--GINWLSGRGHRYSYKVAEMKIR 333

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG9500	NP_609018.3	FReD	76..287	CDD:238040	86/212 (41%)
Fcna	NP_112638.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	47..114
		Collagen	<67..108	CDD:460189
		FReD	123..333	CDD:238040	90/223 (40%)
		A domain, contributes to trimerization. /evidence=ECO:0000250	123..162		13/49 (27%)
		B domain, contributes to trimerization. /evidence=ECO:0000250	163..251		36/88 (41%)
		P domain. /evidence=ECO:0000250|UniProtKB:O00602	326..335		4/8 (50%)