DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG9500 and si:ch211-203k16.3

DIOPT Version :9

Sequence 1:	NP_609018.3	Gene:	CG9500 / 33888	FlyBaseID:	FBgn0031804	Length:	292	Species:	Drosophila melanogaster
Sequence 2:	XP_021324371.1	Gene:	si:ch211-203k16.3 / 559151	ZFINID:	ZDB-GENE-041014-290	Length:	425	Species:	Danio rerio

Alignment Length:	210	Identity:	84/210 - (40%)
Similarity:	117/210 - (55%)	Gaps:	20/210 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly    89 GIYT-VQVLGLKPFQVSCDAEIAGTGWTVMARRTSNKLNFFRSWAEYKNGFGQLDGDFFIGLDKL 152
            |||| |..||..|.:|.||.:..|.||||:.||....:||.|||.|||.|||.|..::::|.:.:
Zfish   217 GIYTVVPSLGAMPVEVYCDMDTDGGGWTVIQRRQDGSVNFDRSWKEYKEGFGDLHTEYWLGNEHI 281

  Fly   153 HAITKSQPHELYIHLEDFEGQTRYAHYDEIFIESENKFYAMTKLGEFTGDAGDSM--IHNRNQNF 215
            |.:|....:.|.|.|||:..:.::|.|....:|.||..|.:...| |:|...||.  .|:: |.|
Zfish   282 HDLTSQGDYMLRIDLEDWSNKHKHALYQSFSVEDENTQYRLHVSG-FSGTVEDSFSWYHDK-QGF 344

  Fly   216 STFDRDNDGWHKNCAEEYVGAWWHLNCTYSNLFGIYVKGDEGQY-FQWK------GIVWHSWR-T 272
            ||.|..|     .|||.....||:..|.|:||.|||.||  |:| .:.|      |:||.:|: :
Zfish   345 STPDTGN-----ICAEISHAGWWYNQCFYTNLNGIYYKG--GRYSLKGKNSLGPDGVVWFTWKDS 402

  Fly   273 ESYSYKVMQMMVRPK 287
            :.||.:.:.||:|||
Zfish   403 DYYSLRRVSMMIRPK 417

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG9500	NP_609018.3	FReD	76..287	CDD:238040	82/208 (39%)
si:ch211-203k16.3	XP_021324371.1	SMC_N	73..>158	CDD:330553
si:ch211-203k16.3	XP_021324371.1	FReD	202..417	CDD:238040	82/208 (39%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000029
OrthoInspector	1	1.000	-	-		mtm6515
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X25
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	5	4.910