DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9500 and fgg

DIOPT Version :9

Sequence 1:NP_609018.3 Gene:CG9500 / 33888 FlyBaseID:FBgn0031804 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_998219.1 Gene:fgg / 406327 ZFINID:ZDB-GENE-040426-1998 Length:431 Species:Danio rerio


Alignment Length:306 Identity:89/306 - (29%)
Similarity:142/306 - (46%) Gaps:58/306 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 AMDSESFQNDTAIR-NKPELKSLYKLVLALLEE-NQSNASTENIQ----KSSSDLNTTG--LSGR 76
            |.:.:.:|..:.:: |:.::..|.::.:.|.:. .:....|..||    |...|:...|  :||.
Zfish   122 AQEEQIYQLQSVLQANEKKITDLKQMSMQLDQMCKEPCKDTVEIQTVTGKDCQDIANKGGKVSGL 186

  Fly    77 Y---PSQCPTYPPAHGIYTVQVLGLKPFQVSCDAEIAGTGWTVMARRTSNKLNFFRSWAEYKNGF 138
            |   |::.|                :.|.|.|:.:..|.||||:.||....::|.::|.:||.||
Zfish   187 YYVKPARAP----------------EAFLVYCEIDSFGRGWTVLQRRRDGSVDFSKNWIQYKEGF 235

  Fly   139 GQLDGD----FFIGLDKLH--AITKSQPHELYIHLEDFEGQTRYAHYDEIFIESENKFYAMTKLG 197
            |.|..|    |::|.:|:|  ::..|.|:.|.|.:.|:||..:||.|....:..|...|.:|...
Zfish   236 GYLSPDDRTEFWLGNEKIHLLSVQSSVPYVLRIEMVDWEGNKKYADYATFKLGPEVDAYRLTYAY 300

  Fly   198 EFTGDAGDSM---------------IHNRNQNFSTFDRDNDGWHKNCAEEYVGAWWHLNCTYSNL 247
            .|.|||||:.               .||..| |||.|||||.:..:||::....||...|..::|
Zfish   301 YFGGDAGDAFDGYDFGDDPSDKFYTSHNGMQ-FSTVDRDNDKFQGHCAQQDGSGWWMNRCHAAHL 364

  Fly   248 FGIYVKGDEGQYFQW-------KGIVWHSWRTESYSYKVMQMMVRP 286
            .|.|.:|  |:|.:.       .||:|.:|.:..||.|...|.:.|
Zfish   365 NGKYYQG--GKYTEKDAESGYDNGIIWATWHSRWYSLKETTMKIIP 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9500NP_609018.3 FReD 76..287 CDD:238040 76/242 (31%)
fggNP_998219.1 Fib_alpha 32..166 CDD:285864 6/43 (14%)
FReD 169..409 CDD:238040 81/259 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X25
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.900

Return to query results.
Submit another query.