DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9500 and Fibcd1

DIOPT Version :9

Sequence 1:NP_609018.3 Gene:CG9500 / 33888 FlyBaseID:FBgn0031804 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_001101299.1 Gene:Fibcd1 / 311861 RGDID:1309097 Length:459 Species:Rattus norvegicus


Alignment Length:297 Identity:98/297 - (32%)
Similarity:140/297 - (47%) Gaps:63/297 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 LKSLYKLVLALLEENQSNAS---------TENIQKS--------SSDLNTTGLSGRYPSQC---- 81
            |:|....::.||.|:|.:.:         .|.:|:.        .:||......|..|..|    
  Rat   173 LQSEQGRLIQLLSESQGHMAHLVNSVSDVLEALQRERGLGRPRVKADLQRAPSRGARPRGCANGS 237

  Fly    82 ----------------------PTYPPAHGIYTVQVLGLKPFQVSCDAEIAGTGWTVMARRTSNK 124
                                  ||:.||            .|||.||....|.||||..||....
  Rat   238 RPRDCLDVLLSGQQDDGVYSVFPTHYPA------------GFQVYCDMRTDGGGWTVFQRREDGS 290

  Fly   125 LNFFRSWAEYKNGFGQLDGDFFIGLDKLHAITKSQPHELYIHLEDFEGQTRYAHYDE----IF-I 184
            :||||.|..|:.|||:|.|:.::||.::||:|....:||::.||||:..|.||||..    :| :
  Rat   291 VNFFRGWEAYREGFGKLTGEHWLGLKRIHALTTQAAYELHVDLEDFDNGTAYAHYGSFGVGLFSV 355

  Fly   185 ESENKFYAMTKLGEFTGDAGDSMIHNRNQNFSTFDRDNDGWHKNCAEEYVGAWWHLNCTYSNLFG 249
            :.|...|.:| :.:::|.||||::.:....|:|.|||:|....|||..|.||||:.||..|||.|
  Rat   356 DPEEDGYPLT-VADYSGTAGDSLLKHSGMRFTTKDRDSDHSENNCAAFYRGAWWYRNCHTSNLNG 419

  Fly   250 IYVKGDEGQYFQWKGIVWHSWRTESYSYKVMQMMVRP 286
            .|::|....|..  |:.|.||....||.|..:|.:||
  Rat   420 QYLRGPHASYAD--GVEWSSWTGWQYSLKFSEMKIRP 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9500NP_609018.3 FReD 76..287 CDD:238040 87/242 (36%)
Fibcd1NP_001101299.1 FReD 239..455 CDD:238040 85/231 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 186 1.000 Domainoid score I3251
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H122246
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000029
OrthoInspector 1 1.000 - - mtm12326
orthoMCL 1 0.900 - - OOG6_100073
Panther 1 1.100 - - O PTHR19143
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X25
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.810

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