DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9500 and Tnn

DIOPT Version :10

Sequence 1:NP_609018.3 Gene:CG9500 / 33888 FlyBaseID:FBgn0031804 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_001100659.2 Gene:Tnn / 304913 RGDID:1306002 Length:1562 Species:Rattus norvegicus


Alignment Length:264 Identity:86/264 - (32%)
Similarity:136/264 - (51%) Gaps:27/264 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 ELKSL-----YKLVLALLEENQSNASTENIQKSSSDLNTTGLSGRYPSQCP-----TYPPAHGIY 91
            ||:.|     |.:.|...:.||.:.|.      |:.|:|......:||.|.     |...|.|:|
  Rat  1289 ELQDLEQGVTYPVSLVAFKGNQRSRSV------STTLSTVDARFPHPSDCSQVQQNTNAAASGLY 1347

  Fly    92 TVQVLG--LKPFQVSCDAEIAGTGWTVMARRTSNKLNFFRSWAEYKNGFGQLDGDFFIGLDKLHA 154
            |:.:.|  .:|.||.||.:..|.||.|..||.:.:|:||:.|..|..|||....:|::||||||.
  Rat  1348 TIYLNGDASRPMQVYCDMDTDGGGWIVFQRRNTGQLDFFKRWRSYVEGFGDPMKEFWLGLDKLHN 1412

  Fly   155 IT--KSQPHELYIHLEDFEGQTRYAHYDEIFIESENKFYAMTKLGEFTGDAGDSMIHNRNQNFST 217
            :|  .:..:|:...|:. ..::.||.||...:.|..:.|.:: :|::.|.|||::.::....|:|
  Rat  1413 LTTGTTTRYEVRADLQT-ANESAYAVYDFFQVASSKERYKLS-VGKYRGTAGDALTYHNGWKFTT 1475

  Fly   218 FDRDNDGWHKNCAEEYVGAWWHLNCTYSNLFGIYVKGDEGQYFQWKGIVWHSWRTESYSYKVMQM 282
            ||||||....|||..:.|.||:.||..:|..|.|     |:....:|:.|..|:...:|...:::
  Rat  1476 FDRDNDIALSNCALTHHGGWWYKNCHLANPNGKY-----GETKHSEGVNWEPWKGHEFSIPYVEL 1535

  Fly   283 MVRP 286
            .:||
  Rat  1536 KIRP 1539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9500NP_609018.3 FReD 76..287 CDD:238040 75/220 (34%)
TnnNP_001100659.2 EGF_2 142..166 CDD:400365
C_rich_MXAN6577 <171..>237 CDD:469225
EGF_Tenascin 171..198 CDD:480934
EGF_2 236..259 CDD:400365
fn3 264..332 CDD:394996
fn3 359..434 CDD:394996
FN3 444..529 CDD:238020
FN3 532..608 CDD:214495
FN3 582..1094 CDD:442628
fn3 972..1049 CDD:394996
FN3 1060..1136 CDD:214495
FN3 1148..1224 CDD:214495
fn3 1236..1309 CDD:394996 5/19 (26%)
FReD 1327..1540 CDD:238040 75/220 (34%)
Blue background indicates that the domain is not in the aligned region.

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