DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9500 and Tnc

DIOPT Version :9

Sequence 1:NP_609018.3 Gene:CG9500 / 33888 FlyBaseID:FBgn0031804 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_001356140.1 Gene:Tnc / 21923 MGIID:101922 Length:2110 Species:Mus musculus


Alignment Length:309 Identity:95/309 - (30%)
Similarity:142/309 - (45%) Gaps:50/309 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 FYSTEAMDSESFQNDTAIRN-KPELKSL--YKLV-------------------LALLEENQSNAS 57
            |.:||.      |::||:.. :|...|:  |.||                   .:|.:.:.|...
Mouse  1802 FTATEV------QSETALLTWRPPRASVTGYLLVYESVDGTVKEVIVGPDTTSYSLADLSPSTHY 1860

  Fly    58 TENIQKSSSDL---------NTTGLSGRYPSQCP----TYPPAHGIYTVQVLGLK--PFQVSCDA 107
            :..||..|..|         .|.||...:|..|.    ......|:||:.:.|.|  ..:|.||.
Mouse  1861 SARIQALSGSLRSKLIQTIFTTIGLLYPFPRDCSQAMLNGDTTSGLYTIYINGDKTQALEVYCDM 1925

  Fly   108 EIAGTGWTVMARRTSNKLNFFRSWAEYKNGFGQLDGDFFIGLDKLHAITKSQPHELYIHLEDFEG 172
            ...|.||.|..||.:.:.:|:|:|..|..|||....:|::|||.|..||....:||.:.|:| .|
Mouse  1926 TSDGGGWIVFLRRKNGREDFYRNWKAYAAGFGDRREEFWLGLDNLSKITAQGQYELRVDLQD-HG 1989

  Fly   173 QTRYAHYDEIFIESENKFYAMTKLGEFTGDAGDSMIHNRNQNFSTFDRDNDGWHKNCAEEYVGAW 237
            ::.||.||...:......|.: |:..::|.|||||.::..::|||:|:|.|....|||..|.||:
Mouse  1990 ESAYAVYDRFSVGDAKSRYKL-KVEGYSGTAGDSMNYHNGRSFSTYDKDTDSAITNCALSYKGAF 2053

  Fly   238 WHLNCTYSNLFGIYVKGDEGQYFQWKGIVWHSWRTESYSYKVMQMMVRP 286
            |:.||...||.|.|...:..|     |:.|..|:...||.:..:|.:||
Mouse  2054 WYKNCHRVNLMGRYGDNNHSQ-----GVNWFHWKGHEYSIQFAEMKLRP 2097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9500NP_609018.3 FReD 76..287 CDD:238040 75/217 (35%)
TncNP_001356140.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 69..91
EGF_2 222..247 CDD:285248
EGF_2 345..372 CDD:285248
EGF_2 377..403 CDD:285248
EGF_2 408..434 CDD:285248
EGF_2 468..496 CDD:285248
EGF_2 504..527 CDD:285248
EGF_2 533..558 CDD:285248
EGF_2 592..620 CDD:285248
FN3 624..710 CDD:238020
fn3 713..793 CDD:333790
FN3 804..891 CDD:238020
fn3 894..976 CDD:333790
fn3 986..1064 CDD:333790
fn3 1075..1147 CDD:333790
fn3 1169..1246 CDD:333790
fn3 1257..1336 CDD:333790
fn3 1348..1417 CDD:333790
fn3 1442..1519 CDD:333790
fn3 1530..1610 CDD:333790
fn3 1620..1699 CDD:333790
fn3 1711..1785 CDD:333790
fn3 1797..1869 CDD:333790 15/72 (21%)
Fibrinogen_C 1889..2098 CDD:278572 75/216 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2579
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100073
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.710

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