DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG9500 and Fcnb

DIOPT Version :10

Sequence 1:NP_609018.3 Gene:CG9500 / 33888 FlyBaseID:FBgn0031804 Length:292 Species:Drosophila melanogaster
Sequence 2:NP_446086.1 Gene:Fcnb / 114091 RGDID:621222 Length:319 Species:Rattus norvegicus


Alignment Length:236 Identity:94/236 - (39%)
Similarity:124/236 - (52%) Gaps:20/236 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 DLNTTGLSGRY----PSQ-CPTYPPA-----------HGIYTVQVLGLKPFQVSCDAEIAGTGWT 115
            |....|:.|..    ||| |.|.|..           .|.||:.:...:|..|.||.:..|.|||
  Rat    85 DRGEKGVRGEKGDTGPSQSCATGPRTCKELLTRGYFLTGWYTIYLPDCRPLTVLCDMDTDGGGWT 149

  Fly   116 VMARRTSNKLNFFRSWAEYKNGFGQLDGDFFIGLDKLHAITKSQPHELYIHLEDFEGQTRYAHYD 180
            |..||....::|||.|..||.|||...|:|::|.|.:||:|....:||.:.|.||:|...:|.|.
  Rat   150 VFQRRIDGTVDFFRDWTSYKQGFGSQLGEFWLGNDNIHALTTQGTNELRVDLADFDGNHDFAKYS 214

  Fly   181 EIFIESENKFYAMTKLGEFT-GDAGDSMIHNRNQNFSTFDRDNDGWHKNCAEEYVGAWWHLNCTY 244
            ...|:.|.:.|.:. ||.|. |.||||:....|..|||.|:|||....|||..|.||||:.:|..
  Rat   215 SFQIQGEAEKYKLI-LGNFLGGGAGDSLTSQNNMLFSTKDQDNDQGSSNCAVRYHGAWWYSDCHT 278

  Fly   245 SNLFGIYVKGDEGQYFQWKGIVWHSWRTESYSYKVMQMMVR 285
            |||.|:|::|....|.  .|:.|.||:..:|||||.:|.||
  Rat   279 SNLNGLYLRGLHKSYA--NGVNWKSWKGYNYSYKVSEMKVR 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9500NP_609018.3 FReD 76..287 CDD:238040 91/227 (40%)
FcnbNP_446086.1 Collagen 45..100 CDD:460189 3/14 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 53..106 7/20 (35%)
FReD 108..317 CDD:238040 84/211 (40%)

Return to query results.
Submit another query.