DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9500 and tnc

DIOPT Version :10

Sequence 1:NP_609018.3 Gene:CG9500 / 33888 FlyBaseID:FBgn0031804 Length:292 Species:Drosophila melanogaster
Sequence 2:XP_004916768.1 Gene:tnc / 100494697 XenbaseID:XB-GENE-1002816 Length:1829 Species:Xenopus tropicalis


Alignment Length:313 Identity:98/313 - (31%)
Similarity:149/313 - (47%) Gaps:52/313 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 TEAMD------SESFQNDTAIRN-KPELKSLYKLVL---------------------ALLEENQS 54
            |.|:|      :...|:::|:.. ||...::...||                     .||:.:.|
 Frog  1512 TTALDGPRDLSASEIQSESALLTWKPPRSTITGYVLIYESVDGTVKEVVVGPDTTSYRLLDLSPS 1576

  Fly    55 NASTENIQKSSSDLN---------TTGLSGRYPSQCP----TYPPAHGIYTVQVLG--LKPFQVS 104
            ......:|..:.|..         |.||...||..|.    ......|:||:.|.|  .:|.:|.
 Frog  1577 AQYIARVQAINGDRRSKEIQTIFITIGLLYPYPKDCSQALLNGEADSGLYTIYVNGDQSQPMEVY 1641

  Fly   105 CDAEIAGTGWTVMARRTSNKLNFFRSWAEYKNGFGQLDGDFFIGLDKLHAITKSQPHELYIHLED 169
            ||..:.|.||.|..|||.....|:|:|..|..|||.::.:||:||:.||.:|....:||.:.|.|
 Frog  1642 CDMSVDGGGWIVFLRRTDGSEEFYRNWKTYSAGFGNINNEFFMGLENLHKLTSLGQYELRVDLRD 1706

  Fly   170 FEGQTRYAHYDEIFI-ESENKFYAMTKLGEFTGDAGDSMIHNRNQNFSTFDRDNDGWHKNCAEEY 233
             ..:|.||.||:..: :::::|  ..|:..::|.|||||.::..::|||||:|||....|||..|
 Frog  1707 -NDETAYAVYDKFSVGDAKSRF--RLKVEGYSGTAGDSMTYHNGRSFSTFDKDNDSAITNCALSY 1768

  Fly   234 VGAWWHLNCTYSNLFGIYVKGDEGQYFQWKGIVWHSWRTESYSYKVMQMMVRP 286
            .||:|:.||...||.|.|  ||....   :|:.|..|:...||.:..:|.:||
 Frog  1769 KGAFWYKNCHRVNLMGRY--GDTNHS---QGVNWFHWKGHEYSIQFAEMKIRP 1816

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9500NP_609018.3 FReD 76..287 CDD:238040 81/218 (37%)
tncXP_004916768.1 EGF_Tenascin 187..214 CDD:480934
EGF_Tenascin 249..276 CDD:480934
EGF_Tenascin 280..307 CDD:480934
EGF_Tenascin 342..369 CDD:480934
EGF_Tenascin 373..399 CDD:480934
EGF_Tenascin 404..431 CDD:480934
EGF_Tenascin 435..461 CDD:480934
EGF_Tenascin 466..492 CDD:480934
EGF_Tenascin 497..524 CDD:480934
EGF_Tenascin 528..554 CDD:480934
EGF_Tenascin 559..586 CDD:480934
EGF_Tenascin 590..617 CDD:480934
fn3 620..691 CDD:394996
FN3 724..1230 CDD:442628
FN3 1241..>1589 CDD:442628 13/76 (17%)
FReD 1607..1817 CDD:238040 81/218 (37%)
Blue background indicates that the domain is not in the aligned region.

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