DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG9500 and tnca

DIOPT Version :9

Sequence 1:NP_609018.3 Gene:CG9500 / 33888 FlyBaseID:FBgn0031804 Length:292 Species:Drosophila melanogaster
Sequence 2:XP_021332057.1 Gene:tnca / 100149028 ZFINID:ZDB-GENE-130530-849 Length:2336 Species:Danio rerio


Alignment Length:282 Identity:94/282 - (33%)
Similarity:143/282 - (50%) Gaps:33/282 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SFQN-DTAIRN---KPELKS----------LYKLVLALLEENQSNASTENIQKSSSDLNTTGLSG 75
            :||| |..:|.   .|.:.|          .|.::|..:.|::.:.|.      |::..|.|:..
Zfish  2055 TFQNSDADVREVIVDPSVASHTLSNLRSTTKYTVILQAVSEDKRSRSI------STEFTTVGMLY 2113

  Fly    76 RYPSQCP----TYPPAHGIYTVQVLG--LKPFQVSCDAEIAGTGWTVMARRTSNKLNFFRSWAEY 134
            .:|..|.    ....:.|.||:.:.|  .:|.:|.||....|.||.:..||.|.||||:|:|..|
Zfish  2114 GHPRDCSEALLNGETSSGPYTIYINGDEKQPLRVYCDMTTDGGGWMLFLRRQSGKLNFYRNWRNY 2178

  Fly   135 KNGFGQLDGDFFIGLDKLHAITKSQPHELYIHLEDFEGQTRYAHYDEIFIESENKFYAMTKLGEF 199
            ..|||....:|::||..||.||.::.:|:.:.|.| ..:|.:|.||..:|......|.: ::|.:
Zfish  2179 SAGFGDTSDEFWLGLSNLHKITAAKQYEIRVDLRD-GSETVFAVYDRFYIGDPRSRYKI-QIGAY 2241

  Fly   200 TGDAGDSMIHNRNQNFSTFDRDNDGWHKNCAEEYVGAWWHLNCTYSNLFGIYVKGDEGQYFQWKG 264
            :|.||||:.:::|:.|||:|.|||....|||..|.||:|:.||...||.|.|  ||....   ||
Zfish  2242 SGTAGDSLTYHQNRPFSTYDSDNDIAITNCALSYKGAFWYKNCHRVNLMGKY--GDSSHS---KG 2301

  Fly   265 IVWHSWRTESYSYKVMQMMVRP 286
            |.|..|:...:|....:|.:||
Zfish  2302 INWFHWKGHEHSIPFAEMKIRP 2323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG9500NP_609018.3 FReD 76..287 CDD:238040 80/217 (37%)
tncaXP_021332057.1 EGF_2 189..217 CDD:285248
EGF_2 316..341 CDD:285248
EGF_2 377..403 CDD:285248
EGF_2 408..434 CDD:285248
EGF_2 470..496 CDD:285248
EGF_2 496..527 CDD:285248
EGF_2 530..558 CDD:285248
FN3 593..679 CDD:238020
fn3 682..763 CDD:306538
fn3 772..852 CDD:306538
FN3 862..947 CDD:238020
FN3 954..1036 CDD:238020
FN3 1087..1171 CDD:238020
fn3 1210..1289 CDD:306538
fn3 1301..1376 CDD:306538
fn3 1392..1464 CDD:306538
FN3 1486..1570 CDD:238020
fn3 1574..1649 CDD:306538
fn3 1665..1740 CDD:306538
fn3 1756..1829 CDD:306538
fn3 1846..1925 CDD:306538
fn3 1935..2013 CDD:306538
fn3 2023..2096 CDD:306538 9/40 (23%)
FReD 2114..2323 CDD:238040 78/215 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100073
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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