DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk14 and Asic5

DIOPT Version :9

Sequence 1:NP_609017.2 Gene:ppk14 / 33887 FlyBaseID:FBgn0031803 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_071563.1 Gene:Asic5 / 63866 RGDID:69295 Length:495 Species:Rattus norvegicus


Alignment Length:545 Identity:117/545 - (21%)
Similarity:185/545 - (33%) Gaps:132/545 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TEKE----TRVVADRIRRQ-DQNPLAPVNTKSEIQRAWTLLIDSYISRSHIHGLYLLFLPSMRRR 65
            |||.    .:.:..:|||. .:.||.....:.:...      |..||.| .||::.: ..:..:.
  Rat     4 TEKSKGPAEKGLLGKIRRYLSKRPLPSPTDRKKFDH------DFAISTS-FHGIHNI-AQNQNKV 60

  Fly    66 MRVLWALALICACTVLFHVSYLLGDRYHNK----QFQTIVAHAHASIHHIAFPVVIICNKNRLN- 125
            .:|:|      ...||..||.|:...|...    .:.|..:.....:..|.||.|..||.||.. 
  Rat    61 RKVIW------LSVVLGSVSLLVWQIYSRLVNYFMWPTTTSIEVQYVEKIEFPAVTFCNLNRFQT 119

  Fly   126 ------------WS------RLPEIKSLYNITPSQDELFDRILTAYDGFS---FHKFNAFDSLLG 169
                        |.      ||.||..  |.|.|.:.|  ..:.::..||   |.|.|.|     
  Rat   120 EAVSRFGIIFFLWDIVSKVLRLQEISG--NNTGSPEAL--DFVASHRNFSITEFVKNNGF----- 175

  Fly   170 ESLDELNHLNFTEIVIQMSWRCDEILRDCHWQTASRDCCKLFRPRRLPLGYCLAFNELEKRRGTE 234
                   :||...:|     .|:...:.|.    .:|...:|    ...|.|..||..|..:...
  Rat   176 -------YLNHDTLV-----HCEFFGKTCD----PKDFKHVF----TEYGNCFTFNYGENVQSKN 220

  Fly   235 TGINTGLLLRLLLREGQHAPGNSGLKGFWLTVVESSVWF--------------GFPIEVVPHSRT 285
            ....:|..|:|||...|....::.:.||    .::.|.|              |....|..|:|.
  Rat   221 KVSVSGRGLKLLLDVHQEEFTDNPVPGF----ADAGVIFVIHSPKKEPQFDGLGLSSPVGMHARV 281

  Fly   286 NVAVTAVYHYFDESTLSLPSSWRHCVMDYEEESEHFRTLEGQKYMLENCQAECQQRYLLRYCNCT 350
            .:......|.      ..|  |..|..|.  :..:|.|     |....|..||:.:::.|.|.|.
  Rat   282 TIRQLKTIHQ------EYP--WGECNPDI--KLRNFTT-----YSTYGCLKECKAKHIQRLCGCL 331

  Fly   351 VDLFYPPSNYPAC-RLKDLPCLAAHNHLLQNFEQP-----GEH------PYVHREESGLVCECLH 403
            .  |..|.|...| .||...|::.   :|.:.|:.     |.|      |....|....:.....
  Rat   332 P--FLLPGNGVECDLLKYYNCVSP---ILDHIERKGLCTMGTHNSSCPVPCEETEYPATIAYSTF 391

  Fly   404 NCKSLTLLTDMRKSVQQPWLQPNSSAIESMWLNVYFKKPSMLVYKTNLIYTWVDLIVSFGGICQL 468
            ..:..|.....:.:..|.:::.|...||..:.::.:|     :.:.....:..:|:...||...|
  Rat   392 PSQRATKFLAKKLNQSQEYIRENLVNIEINYSDLNYK-----ITQQQKAVSVPELLADVGGQLGL 451

  Fly   469 CLGCSIISLIEFVFFALYKVPQLYW 493
            ..|.|:|::||.:   .|.....||
  Rat   452 FCGASLITIIEII---EYLFTSFYW 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk14NP_609017.2 ASC 45..483 CDD:279230 105/489 (21%)
Asic5NP_071563.1 deg-1 40..465 CDD:273309 106/493 (22%)
ASC 41..466 CDD:279230 105/493 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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