DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk14 and Scnn1b

DIOPT Version :9

Sequence 1:NP_609017.2 Gene:ppk14 / 33887 FlyBaseID:FBgn0031803 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001258952.1 Gene:Scnn1b / 20277 MGIID:104696 Length:638 Species:Mus musculus


Alignment Length:571 Identity:108/571 - (18%)
Similarity:196/571 - (34%) Gaps:196/571 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 YISRSHIHGLYLLFLPSMRRRMRVLW-ALALICACTVLFH--------------VSYLLGDRYHN 94
            |.:.::.||...:.....::  :.:| .|.|:.||.|.:.              ||..:|     
Mouse    29 YCNNTNTHGPKRIICEGPKK--KAMWFLLTLLFACLVCWQWGVFIQTYLSWEVSVSLSMG----- 86

  Fly    95 KQFQTIVAHAHASIHHIAFPVVIICNKNRLNWSRLPEIKSLYNITPSQDELFDRILTAYDGFS-- 157
              |:|           :.||.|.:||.:...:|::..:  |.::....:.:.::||......|  
Mouse    87 --FKT-----------MNFPAVTVCNSSPFQYSKVKHL--LKDLDELMEAVLEKILAPEASHSNT 136

  Fly   158 -----FHKFN-----AFD----------SLLGESLDELNHL------------------------ 178
                 |..:|     ..|          :|.|:|.:..|..                        
Mouse   137 TRTLNFTIWNHTPLVLIDERNPDHPVVLNLFGDSHNSSNPAPGSTCNAQGCKVAMRLCSANGTVC 201

  Fly   179 ---NFT-----------------------EIVIQMSWRCDEILRDCHWQT---ASRDCCKLFRPR 214
               |||                       :.::.|.:..|.|:..|.:.|   :.|:...:|.| 
Mouse   202 TLRNFTSATQAVTEWYILQATNIFSQVLPQDLVGMGYAPDRIILACLFGTEPCSHRNFTPIFYP- 265

  Fly   215 RLPLGYCLAFN-----EL--EKRRGTETGINTGLLLRLLLREGQ--HAPGNSGLKGFWLTVVESS 270
              ..|.|..||     |.  ....|||.|      |:|:|..||  :.|..:...|..|.:.|..
Mouse   266 --DYGNCYIFNWGMTEETLPSANPGTEFG------LKLILDIGQEDYVPFLASTAGARLMLHEQR 322

  Fly   271 VWFGFP------IEVVPHSRTNVAVTAVYHYFDESTLSLPSSWRHCVMDYEEES-EHFRTLEGQK 328
            .   :|      |..:..:.|::.|..      :........:..|.|:..:.: ::..::....
Mouse   323 T---YPFIREEGIYAMAGTETSIGVLV------DKLQRKGEPYSPCTMNGSDVAIKNLYSVYNTT 378

  Fly   329 YMLENCQAECQQRYLLRYCNCTVDLFYPPSNYPACRLKDLPCLAAHNHLLQNFEQPGEHPYVHRE 393
            |.::.|...|.|.:::|.|:|...|:..|.....|..:|.|..|              :.|::.:
Mouse   379 YSIQACLHSCFQDHMIRNCSCGHYLYPLPEGEKYCNNRDFPDWA--------------YCYLNLQ 429

  Fly   394 ESGLVCE-CLHNCK--------SLTL-LTDMRKSVQQPWL-------QPNSSAIE-----SMWLN 436
            .|....| ||..||        .:|: :.|......:.|:       :..||.|.     .:.||
Mouse   430 MSVTQRETCLSMCKESCNDTQYKMTISMADWPSEASEDWILHVLSQERDQSSNITLSRKGIVKLN 494

  Fly   437 VYFKKPSMLVYKT-------NLIYTWVDLIVSFGGICQLCLGCSIISLIEF 480
            :||::   ..|:|       |:::    |:.:.||.....:|.|::.||||
Mouse   495 IYFQE---FNYRTIEESPANNIVW----LLSNLGGQFGFWMGGSVLCLIEF 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk14NP_609017.2 ASC 45..483 CDD:279230 108/571 (19%)
Scnn1bNP_001258952.1 ENaC 21..621 CDD:273304 108/571 (19%)
deg-1 29..538 CDD:273309 106/569 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 594..620
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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