DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk14 and asic-1

DIOPT Version :9

Sequence 1:NP_609017.2 Gene:ppk14 / 33887 FlyBaseID:FBgn0031803 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_491214.3 Gene:asic-1 / 191422 WormBaseID:WBGene00022815 Length:823 Species:Caenorhabditis elegans


Alignment Length:491 Identity:93/491 - (18%)
Similarity:155/491 - (31%) Gaps:182/491 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 KSEIQRAWTLLIDSYISRSHIHGLYLLFLPSMRRRMRVLWALALICACTVLFHVSYLLGDRYHNK 95
            |:.::||..|.:..:...:..||:...::.:..|  |.:|.|..:...:...|.:||:.:|::..
 Worm     3 KNSLKRALELDVVDFAEHTSAHGIPRAYVSTGWR--RYMWLLCFLFCLSCFGHQAYLIVERFNRN 65

  Fly    96 QFQTIVAHAHASIHHIAFPVVIICNKNRLNWSRLPEIKSLYNITPSQDELFDRILTAYDGFSFHK 160
            .   |:.........|.||.|.|||.|....|...|:.::.|..    |.|:..:...||.:..|
 Worm    66 D---IIVGVEIKFEEIKFPAVTICNMNPYKNSAARELGAIRNAI----EAFELAIDKSDGNAHSK 123

  Fly   161 -----------------------FNAFD--------------SLLGESLDELNHLNFTEIVIQMS 188
                                   |.|.|              |.:|::.|:           ::.
 Worm   124 RKKRSANSKMVPIDLLCKEEHGMFTAHDYGHVECTCVTFEDMSKVGDTDDD-----------EIF 177

  Fly   189 WRC----DEILRDCHWQTASRD--CCKLFRPRRLPLGYCLAFNELEK---------RRGTETGIN 238
            |.|    |...:.||....|..  .||.|...      |:: :|:.|         :.||:..| 
 Worm   178 WNCHQRKDWTHKICHLAEGSNQLKTCKCFEDT------CVS-DEVTKQLVWPLQLSKNGTKLCI- 234

  Fly   239 TGLLLRLLLREGQHAPGNSG------LKGFWLTVVESSVWFGFPIEVVPHSRTNVAVTAVYHYFD 297
                          :|.:||      .:.|.::...:..|.|                    ..:
 Worm   235 --------------SPESSGPRYCASAQKFQVSTCSNCDWLG--------------------KCE 265

  Fly   298 ESTLSLPSSWRHCVMDYEEESE------HFRT---LEG--QKYMLENCQAECQQRYLLRY----- 346
            ||.          .||.|||.:      |...   ::|  :|......:.:..:|.|.||     
 Worm   266 ESD----------DMDLEEEIDSKTCICHHGNCFQIKGNVKKRKRRTPERKVHERLLSRYEGLLA 320

  Fly   347 ----CNCTVDLFYPPSNYPACRLKDLPCLAAHNHLLQNFEQPGEHPYVHREESGLVCECLHNCKS 407
                ||||               |...|::.            ..|.:..|.|...|.|.:|.|:
 Worm   321 VYSHCNCT---------------KQHGCVST------------SVPDMDLENSNKTCLCFYNKKN 358

  Fly   408 LTLLTDMRKSVQQP-WLQPNSSAIESMWLNVYFKKP 442
                ..:....::| |.:...|...:|...||..||
 Worm   359 ----EQIWPCYKEPEWEERKCSRCNTMGDCVYSDKP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk14NP_609017.2 ASC 45..483 CDD:279230 89/477 (19%)
asic-1NP_491214.3 deg-1 16..779 CDD:273309 89/478 (19%)
ASC 17..>104 CDD:279230 21/91 (23%)
ASC <469..788 CDD:295594
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100105
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.