DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk7 and asic1c

DIOPT Version :9

Sequence 1:NP_609016.2 Gene:ppk7 / 33886 FlyBaseID:FBgn0031802 Length:573 Species:Drosophila melanogaster
Sequence 2:XP_021325802.1 Gene:asic1c / 407670 ZFINID:ZDB-GENE-040513-3 Length:562 Species:Danio rerio


Alignment Length:614 Identity:143/614 - (23%)
Similarity:229/614 - (37%) Gaps:175/614 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 PSKLQ-----QQQQPSRSSRLAQQLAQSSWQLALRFGKRTTIHGLDRLLSAKASRWERFVWLCTF 67
            |||.:     :.|.||...:|...|..:...:...|..||.:|||....|...|:.:|..||.  
Zfish     6 PSKQETINRHEAQSPSSCRKLKMTLTHNIKDITTAFVLRTKVHGLKHAFSPHKSKTQRLFWLL-- 68

  Fly    68 VSAFLGAVYVCLILSARYNAAHFQTVVDSTRFP----VYRI-----PFPVITICNRNRLNWQRLA 123
                  |:.|||.|...::   :..::....:|    :|.:     .||.||.||:|||....| 
Zfish    69 ------ALLVCLGLLFTWS---WNRILYLLSYPAVTKIYMVWSNNMTFPAITFCNQNRLRVSSL- 123

  Fly   124 EAKSRFLANGSNSAQQELFELIVGTYDDAYFGHF-------------QSFERL-----RNQPTEL 170
                                    |.||.|:..:             ||...|     |.:...|
Zfish   124 ------------------------TRDDLYYSGYWMDILHLNHTLNRQSVSMLKHSRHRERLLHL 164

  Fly   171 LNY----------VNFSQVVDFMTWRCNELLAECLWRHHAYDCC-EIFSKRRSKNGLCWAFNSLE 224
            |::          :|.::::|.:..:..::|.||  |....:|. :.|:...::.|.|:.|||  
Zfish   165 LDFSHYSPPPDQSLNTTEMIDRLGHQLQDMLLEC--RFRGENCTYKNFTPIYTRYGKCYTFNS-- 225

  Fly   225 TEEGRRMQLLD--PMWPWRTGSAGPMSALSVRVLIQPAKH---WPGHRETNAMKGIDVMV----T 280
               |     ||  |:.....|..|  :.|.:.:.||..::   |....||:...||.|.:    .
Zfish   226 ---G-----LDGNPLLTTLKGGTG--NGLEIMLDIQQDEYLPVWGDTDETSYEAGIKVQIHSQDE 280

  Fly   281 EPFVWHNNPFFVAANTETTMEIEPVIYFYDNDTRGVRSDQRQCVFDDEHNSKDFKSLQGYVYMIE 345
            .||: ....|.||...:|.:..:..:..|.....|   |.|....|.|:.|         .|.|.
Zfish   281 PPFI-DQLGFGVAPGFQTFVSCQQQLLLYLPPPWG---DCRSAPMDSEYFS---------TYSIT 332

  Fly   346 NCQSECHQEYLVRYCNCTM------DLLFPPGQYRSCRAQDLLCLAEHNDLLIYSHNPGEKEFVR 404
            .|:.:|...||:..|||.|      ..:..|.||:.|....|       |.|:      ||:   
Zfish   333 ACRIDCETRYLLENCNCRMVHMPGTSTVCTPEQYKDCADPAL-------DFLV------EKD--- 381

  Fly   405 NQFQGMSCKCFRNCYSLNYISDVRPAFLP--------------PDVYANNSYVDLDVHF---RFE 452
            |.:    |.|...|....|..::....:|              .:.|..::.:.||:.|   .:|
Zfish   382 NDY----CVCDTPCNMTRYGKELSMVKIPSKASAKYLAKKFNKTEQYITDNILVLDIFFEALNYE 442

  Fly   453 TIMVYRTSLVFGWVDLMVSFGGIAGLFLGCSLISGMELAYFLCIEVPAFGLDG--LRRRWKARRQ 515
            .|...:...|.|   |:...||..|||:|.|:::.:|:..:| .||....:.|  ||:|...|..
Zfish   443 KIEQKKAYEVAG---LLGDIGGQMGLFIGASVLTILEIFDYL-YEVLKDKILGSVLRKRRPHRSA 503

  Fly   516 MDLGVTVPTPTLNFQQ--TTPSQLMENYI 542
            .|        .|:|.:  |:|. :..|::
Zfish   504 SD--------NLDFSENPTSPG-VTSNHV 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk7NP_609016.2 ASC 38..493 CDD:279230 121/524 (23%)
asic1cXP_021325802.1 ASC 34..531 CDD:322155 135/586 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm26495
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11690
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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