DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ppk7 and del-4

DIOPT Version :9

Sequence 1:NP_609016.2 Gene:ppk7 / 33886 FlyBaseID:FBgn0031802 Length:573 Species:Drosophila melanogaster
Sequence 2:NP_492230.2 Gene:del-4 / 189033 WormBaseID:WBGene00012116 Length:527 Species:Caenorhabditis elegans


Alignment Length:576 Identity:117/576 - (20%)
Similarity:210/576 - (36%) Gaps:149/576 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 TTIHGLDRLLSAKASRWERFVWLCTFVSAFLGAVYVCLILSARYNAAHFQTVVDSTRFPVYRIPF 106
            |:.||:..:..|.| ||.|..|:...|.:.  |:::...::...|...|....::|.....| .|
 Worm    19 TSTHGVPHIGMANA-RWLRAFWILVVVVSI--ALFIWQFITLLTNYLSFSVNTETTLQFAER-TF 79

  Fly   107 PVITICNRNRLNWQRLAEAKSRFLANGSNSAQQELFELIVGTYDDAY--------FGHFQSFERL 163
            |.:|||:   ||..:|:|.|         |...::..||     |||        ||...|....
 Worm    80 PTVTICH---LNPWKLSETK---------SVDPDMSALI-----DAYNSDSSSAQFGLPASLTAD 127

  Fly   164 RNQP--------TELLNYVNFSQVVDFMTWRCNELLAECLWRHHAYDCCEIFSKRRSKNGLCWAF 220
            |.|.        :|.||...::...| :.:..::::..|.:.....:..:.........|.|..|
 Worm   128 RQQQASKWTLMYSERLNEKQYNDAAD-IAYSYDDMVVSCTYNAKTCNITDFNDFYNPSYGNCLQF 191

  Fly   221 NSLETEEGRRMQLLDPMWPWRTGSAGPMSALSVRVLIQPAKHWPGHRETNAMKGIDVMVTE---- 281
            |:            |.|  :.:..|||:..|.:.:......:.|....:..:  ||:.:.:    
 Worm   192 NT------------DGM--YSSSRAGPLYGLRMVMRTDQDTYLPWTEASGVI--IDIHMQDEIPY 240

  Fly   282 PFVWHNNPFFVAANTETTMEIEPVIYFYDNDTRGVRSDQRQCVFDDEHNSKDFKSLQGYVYMIEN 346
            |.|:   .:|....|.:::.:.     |...|| :......|....:..:..:..    .|.:|.
 Worm   241 PDVF---GYFAPPGTASSLGVS-----YVQTTR-LSKPYGSCTTKTKLKTTHYTG----TYTVEA 292

  Fly   347 CQSECHQEYLVRYCNCTMDLLFPPGQYRSCRAQDLLC------LAEHNDL-LIYSHNPGEKEFVR 404
            |...|.||.::..|.|    .:|...:.|...|.:.|      |:..|.: ||.|.:..|.:.:.
 Worm   293 CFRSCMQEKIIASCGC----YYPAYSHASNTTQYVSCDNGVQTLSNLNCVDLINSADSTEFDVLT 353

  Fly   405 NQFQGMSCKCFRNCYSLNYISDVRPAFLPPDVY----------------ANNSYVD--------L 445
            :      |.|.:.|...:|...|..|..|.|.|                :..|.:|        :
 Worm   354 D------CDCPQPCEIDSYGVTVSTAQWPSDSYVPTECNPGGPSGPWDASGESCLDWYKANTILI 412

  Fly   446 DVHFRFETIMVYRTSLVFGWVDLMVSFGGIAGLFLGCSLISGME------LAYFLCIEVPAFGLD 504
            ::::......|...|..:.:|:.:...||..|||||.|:||.:|      |.:|.|.        
 Worm   413 EIYYERMNFQVLTESPAYTFVNFISDVGGQVGLFLGMSIISAIEYLVLIFLVFFYCC-------- 469

  Fly   505 GLRRRWKARR----QMDLGVTVPTPTLNFQQTTPSQLMENYIMQLKAEKAQQQKAN 556
                ..|:||    |:::.:               :..::.:.|:..::.:.||||
 Worm   470 ----THKSRRAEIEQLEMDI---------------KKAKDDVDQVAEKRKKHQKAN 506

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ppk7NP_609016.2 ASC 38..493 CDD:279230 106/507 (21%)
del-4NP_492230.2 ASC 8..466 CDD:295594 106/507 (21%)
deg-1 14..460 CDD:273309 105/501 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4294
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28677
OrthoDB 1 1.010 - - D303969at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3633
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.860

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