DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cpr and emb-8

DIOPT Version :10

Sequence 1:NP_477158.1 Gene:Cpr / 33883 FlyBaseID:FBgn0015623 Length:679 Species:Drosophila melanogaster
Sequence 2:NP_498103.1 Gene:emb-8 / 175710 WormBaseID:WBGene00001262 Length:662 Species:Caenorhabditis elegans


Alignment Length:676 Identity:333/676 - (49%)
Similarity:457/676 - (67%) Gaps:23/676 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AAIPSGGGDEPFLGLLDVALLAVLIGGAAFYFLRSRKKEEEPTRS-YSIQPTTVCTTSA---SDN 71
            |.|.||      |...|:.:|.:|.|| |..||..:...::|:.| ||....:|.|::|   |:.
 Worm     3 AWIVSG------LDTSDLVVLTLLAGG-AIIFLFMKVFNQQPSSSRYSPTVASVTTSAAASKSNQ 60

  Fly    72 SFIKKLKASGRSLVVFYGSQTGTGEEFAGRLAKEGIRYRLKGMVADPEECDMEELLQLKDIDNSL 136
            |||.::|...|.:::.|||||||.||.:|||||:..||..|.:|.|||:.:.|:|.:|.:::::|
 Worm    61 SFIDRMKNENRQVLIMYGSQTGTAEEMSGRLAKDLTRYTKKAVVVDPEDIECEDLNRLSEVEDAL 125

  Fly   137 AVFCLATYGEGDPTDNAMEFYEWITSGDVDLSGLNYAVFGLGNKTYEHYNKVAIYVDKRLEELGA 201
            .|.|:||||||||||||:...|::.:||.||||:.:||||||||||||:|::.|.:||:||:|||
 Worm   126 LVLCIATYGEGDPTDNAVTLVEYLNAGDCDLSGVRFAVFGLGNKTYEHFNEIGIQMDKQLEKLGA 190

  Fly   202 NRVFELGLGDDDANIEDDFITWKDRFWPAVCDHFGIEGGGEEVLIRQYRLLEQPDVQPDRIYTGE 266
            .|:|.|||||||||:|:||:.|::.|.|.|.:.||.|...|...:|||:|  :|..:...::.||
 Worm   191 KRIFHLGLGDDDANLEEDFMIWREAFLPKVAEEFGWELNTEAETMRQYQL--EPVEEGKALFKGE 253

  Fly   267 IARLHSIQNQRPPFDAKNPFLAPIKVNRELH-KGGGRSCMHIELSIEGSKMRYDAGDHVAMFPVN 330
            ..||.:.:..|||||.|||:||.:.:|.||| :...|||.|||.|:|||::||:||||:|:||.|
 Worm   254 FGRLGAYERPRPPFDVKNPYLATVAINDELHTEHSDRSCRHIEFSVEGSRIRYEAGDHLAVFPTN 318

  Fly   331 DKSLVEKLGQLCNADLDTVFSLINTDTDSSKKHPFPCPTTYRTALTHYLEITAIPRTHILKELAE 395
            |..||::|..:...|.|..|.|:|.|.|:||:||||||||:||||:||::|.|..::|:||.::|
 Worm   319 DPVLVDRLINMLQFDPDHAFRLVNVDEDASKRHPFPCPTTFRTALSHYVDICAPVKSHVLKAISE 383

  Fly   396 YCTDEKEKELLRSMASISPEGKEKYQSWIQDACRNIVHILEDIKSCRPPIDHVCELLPRLQPRYY 460
            ||||:.|||.|..:::.:.||.::|..:|....|:||.:|.|.|:|:|||:::.|||||||.|||
 Worm   384 YCTDDTEKEFLNKLSTANEEGLKEYARYIVKERRSIVDVLTDQKTCKPPIEYLLELLPRLQARYY 448

  Fly   461 SISSSAKLHPTDVHVTAVLVEYKTPTGRINKGVATTYLKNKQPQGSEEVKVPVFIRKSQFRLPTK 525
            ||:||.:|:...:.:.||:.:|......|| ||.|.||..|. .||   |.|||:|||..|||.:
 Worm   449 SIASSPRLNEEKIAICAVVTKYSIGDRDIN-GVCTRYLTTKD-AGS---KSPVFVRKSTMRLPHR 508

  Fly   526 PETPIIMVGPGTGLAPFRGFIQERQFLRDEGKTVGESILYFGCRKRSEDYIYESELEEWVKKGTL 590
            ..|.:||:|||||.||||||:|:|||.::.||.:|...||:|||....||||:.||.::.:...|
 Worm   509 TTTQVIMIGPGTGFAPFRGFLQDRQFHKNAGKEIGAMHLYYGCRHPDHDYIYKDELAKFQEDEVL 573

  Fly   591 -NLKAAFSRDQGKKVYVQHLLEQDADLIWNVIGENKG-HFYICGDAKNMAVDVRNILVKILSTKG 653
             :|..||||.|..|:|||..|.:..|.||:.|  |.| |.||||||:|||.||:..|.||....|
 Worm   574 THLVCAFSRAQEHKIYVQDRLWETRDRIWDAI--NVGAHVYICGDARNMARDVQATLQKIFREIG 636

  Fly   654 NMSEADAVQYIKKMEAQKRYSADVWS 679
            ..||.:||.|.|.||..|||.|||||
 Worm   637 GKSETEAVAYFKDMEKTKRYQADVWS 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CprNP_477158.1 Flavodoxin_1 86..223 CDD:425562 81/136 (60%)
CYPOR 281..678 CDD:99801 202/399 (51%)
emb-8NP_498103.1 Flavodoxin_1 75..212 CDD:425562 81/136 (60%)
CYPOR 268..661 CDD:99801 202/399 (51%)

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