DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pez and ptprfb

DIOPT Version :10

Sequence 1:NP_609013.1 Gene:Pez / 33882 FlyBaseID:FBgn0031799 Length:1252 Species:Drosophila melanogaster
Sequence 2:XP_068069044.1 Gene:ptprfb / 799867 ZFINID:ZDB-GENE-060503-530 Length:1915 Species:Danio rerio


Alignment Length:668 Identity:153/668 - (22%)
Similarity:250/668 - (37%) Gaps:140/668 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   655 PSIMSQLRQSAMSQAAAAAAG-SVVTQSSPTLP---PSGYRSSVPPPASSPLPPPVVASSHKSAT 715
            |||.|  |..:.|.|.|.:.| ..|.::|..|.   |..|:|.|        |..::.:......
Zfish  1007 PSIQS--RTMSTSPAFATSFGVKAVMKTSVLLTWEVPENYKSQV--------PFKILYNQQSVEV 1061

  Fly   716 PAPLQRSLVNGSIEP--IYENVPLPQRASGGSSGAANTEAMRQRASSIQSAPGVV---PVPAARN 775
            ...|:|.|:. .::|  .|..|.:   :.|.|:|..      |:..||::||.:.   ||....:
Zfish  1062 QGNLKRKLIT-RLQPDTDYSFVLM---SRGNSAGGL------QQQVSIRTAPDLFKTKPVLYTAD 1116

  Fly   776 ASSNNVVTVTVNSPPDDGNIKKY----------------GADRAASTELLFLEPQAPKRTNRAAS 824
            .::|..:|:.:...|....::.|                ..|.....|||.....|..|..    
Zfish  1117 QTNNGKLTINLPKVPTSAPVRCYYIVVVPVSQTSSRQWINPDEMELDELLESSEGAHLRRR---- 1177

  Fly   825 AAPDMGATPPPRQHRSTAS---LNKSSTVDMITPAGDTL------------QQQFSAMNLSANTS 874
                       |:|..|..   ..|.||:......||.|            .|.|... :.|...
Zfish  1178 -----------RRHTDTVRPYIAAKLSTLPETFTLGDELDYSGFINRPLPNNQHFQCF-VMAELK 1230

  Fly   875 ASTSSMFNSTLDTTSSSAASKDLKRKKRWNFLSRS-KTPD------------------------- 913
            .......|....|.|:|..|..:..:.. |.:.|| ..|:                         
Zfish  1231 DQYPVTANEKQRTFSASPYSDPIIVQGE-NQMQRSVDQPEMLWVMGPVLAVVLIIIIVIAILLFK 1294

  Fly   914 KQKSATLGREKATTAGQHSKLAAKLKLAQD----DLNLPNRWSTGVNKPQPISGRYSKDKLCQIL 974
            :::::.|.::      .||.......||..    ::...|..:.|:.:..|||.....|.:.:: 
Zfish  1295 RKRASPLPKD------DHSGGVKDCLLASSSDPVEMRRLNYQTPGMREHPPISVSELADHIERL- 1352

  Fly   975 DQKLSDSQLF-MEFERIPKRREHALYECALLEENEPKNHDPNFLPYDDNRVRLTPCRDNRHG--Y 1036
              |.:|:..| .|:|.|...::.. :|.:.||.|:|||...|.:.||.:||.|||. |...|  |
Zfish  1353 --KANDALRFSQEYESIDPGQQFT-WENSNLEVNKPKNRYANVIAYDHSRVVLTPV-DGVPGSDY 1413

  Fly  1037 VNASSISATVGTKQRFYIVAQSPQEPLTMRIFWQCVWEADVYLVVQLT--EDMSYIPRNSHQRLE 1099
            :|::.|...  .||..||..|.|. |.|:..||:.:||.....:|.:|  |:.|.:..:.:..:.
Zfish  1414 INSNYIDGY--RKQNAYIATQGPL-PETLSDFWRMIWEQRASTIVMMTRLEEKSRVKCDQYWPIR 1475

  Fly  1100 ----FGQFQVYQEFSQTTDRCTTIKLRLYHVPSRRYRSVWYLQYADWAEQNCPRDVNHFLDFLEE 1160
                :|..||....:......:.....||...|...|.|...|:..|.:...|......|.||..
Zfish  1476 GTETYGMIQVTMLDAVELATYSVRTFALYKNGSSEKREVRQFQFMAWPDHGVPEYPTPILAFLRR 1540

  Fly  1161 LNSVRLASTQEVPPGHNTNPPVLLHCLEGGGRSGVTLTADLLLYTLDHNEDLDIPRVIGQLRHQR 1225
            :.:..       ||...   |:::||..|.||:|..:..|.:|..:.|.:.:||...:..:|.||
Zfish  1541 VKACN-------PPDAG---PMVVHCSAGVGRTGCFIVIDAMLERMKHEKTVDIYGHVTCMRSQR 1595

  Fly  1226 DSIIPSLAQYKFIYNLLI 1243
            :.::.:..||.||:..|:
Zfish  1596 NYMVQTEDQYIFIHEALL 1613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PezNP_609013.1 FERM_F1_PTPN14_like 17..107 CDD:340619
FERM_M 112..230 CDD:459788
FERM_C_PTPN14_PTPN21 225..317 CDD:270009
PTP_DSP_cys 1036..1246 CDD:475123 55/214 (26%)
ptprfbXP_068069044.1 I-set 35..126 CDD:400151
Ig strand B 52..56 CDD:409570
Ig strand C 65..69 CDD:409570
Ig strand E 88..95 CDD:409570
Ig strand F 106..111 CDD:409570
Ig strand G 119..122 CDD:409570
IgI_2_RPTP_IIa_LAR_like 138..233 CDD:409400
Ig strand A 138..140 CDD:409400
Ig strand A' 145..149 CDD:409400
Ig strand B 152..161 CDD:409400
Ig strand C 166..172 CDD:409400
Ig strand C' 174..176 CDD:409400
Ig strand D 184..188 CDD:409400
Ig strand E 197..202 CDD:409400
Ig strand F 211..218 CDD:409400
Ig strand G 221..232 CDD:409400
IgI_3_RPTP_IIa_LAR_like 242..323 CDD:409401
Ig strand A 242..244 CDD:409401
Ig strand A' 248..252 CDD:409401
Ig strand B 255..263 CDD:409401
Ig strand C 268..274 CDD:409401
Ig strand C' 276..278 CDD:409401
Ig strand D 281..285 CDD:409401
Ig strand E 290..295 CDD:409401
Ig strand F 302..309 CDD:409401
FN3 <303..>578 CDD:442628
Ig strand G 313..322 CDD:409401
FN3 472..1046 CDD:442628 14/40 (35%)
FN3 615..709 CDD:238020
FN3 1018..1091 CDD:214495 19/84 (23%)
R-PTPc-F-1 1343..1618 CDD:350474 79/289 (27%)
PTP_DSP_cys 1621..1912 CDD:475123
Blue background indicates that the domain is not in the aligned region.

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