DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pez and FRMD1

DIOPT Version :10

Sequence 1:NP_609013.1 Gene:Pez / 33882 FlyBaseID:FBgn0031799 Length:1252 Species:Drosophila melanogaster
Sequence 2:XP_011534439.1 Gene:FRMD1 / 79981 HGNCID:21240 Length:614 Species:Homo sapiens


Alignment Length:614 Identity:122/614 - (19%)
Similarity:198/614 - (32%) Gaps:195/614 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 CRQYNVTSKSLFVISVHH----LLDTSSTVDCTISSESKGQECLDNVCQRLLIQQPEFFGLRYLV 69
            |.|...|.....:.|.|.    ||.:...:...:..::.|:|....||....|:..:||||..: 
Human    79 CSQQEPTLGMDAMASEHRDVLVLLPSREQLRLAVGVKATGRELFQQVCNVASIRDAQFFGLCVV- 142

  Fly    70 KGKDKEDEFKWIDLERSLSRQL------------EKYAAGPKIYLRVRHYVTTGVRHLSDEATRF 122
                :.:|:.::|||:.||:..            ||..|....:|||:|||..| |.:||...|.
Human   143 ----RNNEYIFMDLEQKLSKYFSKDWKKERNEGNEKPRAPFVAFLRVQHYVENG-RVISDHRARH 202

  Fly   123 YYFLQLKSDIYEGRIACDIRTAILLALYCRQAEYDSYQGD-------------------KQSKDY 168
            .|:..||..:...:.|.......|||....||:...::..                   |:..||
Human   203 LYYCHLKERVLRSQCAHREEAYFLLAACALQADLGEHRESAHAGRYFEPHSYFPQWIITKRGIDY 267

  Fly   169 LKKSL-VLPRNMQGLANDDSMLEGLIVEVLQQQAGIAHLSQSQAEEMYIQCCQQLEGYGEERFAA 232
            :.:.: .|.|..|||:..::||                        .:||...:||......|..
Human   268 ILRHMPTLHRERQGLSPKEAML------------------------CFIQEACRLEDVPVHFFRL 308

  Fly   233 -KDTLGN--DLLLGLAINGMVV--NADNGRQY---FPWKEFHTVTIDKRTIKIEQNKLDGGGSIV 289
             ||....  .::||||:.|:.:  ..|...|.   .||.....:....:.::|:.:.|.....:|
Human   309 HKDKKEGRPTVILGLALRGVHIYQEVDRAPQLLYDLPWPHVGKLAFLGKKLEIQLDGLPAAQKLV 373

  Fly   290 GSFIFSEADTARYFWKLTISQHKFFKRYIDTATPSSLGSGADAESGPLGVDSVGYVDYDYNEAAA 354
              :.......:|:...|..:.|:...|...|                                  
Human   374 --YYTGCTWRSRHLLHLLRASHQLHLRVRPT---------------------------------- 402

  Fly   355 AEQLQQHHQQQQHMQQQQQIQQQQMISSNISLATSANQMLGQSSS------CLDLSNNNLHSSSG 413
               |||..|:::  .:::|..::..||..:.|..::....|...|      ||...:.:.|.|| 
Human   403 ---LQQLRQREE--AEEKQHYRESYISDELELDLASRSFPGSGVSSQHCPHCLSRHSADSHGSS- 461

  Fly   414 MLHHGGSNNNNNNDERERLKAMLP----------------TYRPAPD---------YETAVQLKY 453
              :..|...|:...|...:...:|                |.|..|.         .|...|::.
Human   462 --YTSGIKANSWLRESREMSVDVPLEVHGLHEKEPSSSPRTSRSHPSTRGDSQATRQEPCTQVRT 524

  Fly   454 RTPSAE-FHNVALAMAAPGNAYYAGSQPDVHNPGMHNENLLYGHMTAHRYPDVAQPAAALHHHIN 517
            |..||| .|.:        ....||...:.|:.|:.:..|                         
Human   525 RGQSAEAVHQI--------QEMTAGVSEEQHSHGLDDMQL------------------------- 556

  Fly   518 LYQAQHQPQSHPQPMSPAQAYLELSQRMH 546
                 ||...||.|.|       ||...|
Human   557 -----HQLALHPAPTS-------LSHTFH 573

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PezNP_609013.1 FERM_F1_PTPN14_like 17..107 CDD:340619 25/105 (24%)
FERM_M 112..230 CDD:459788 27/137 (20%)
FERM_C_PTPN14_PTPN21 225..317 CDD:270009 18/99 (18%)
PTP_DSP_cys 1036..1246 CDD:475123
FRMD1XP_011534439.1 FERM_F1_FRMD1 95..192 CDD:340717 27/101 (27%)
FERM_M 190..306 CDD:459788 28/140 (20%)
FERM_C_FRMD1_FRMD6 299..407 CDD:270006 24/146 (16%)
Blue background indicates that the domain is not in the aligned region.

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