DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pez and ptpn4b

DIOPT Version :9

Sequence 1:NP_001260127.1 Gene:Pez / 33882 FlyBaseID:FBgn0031799 Length:1252 Species:Drosophila melanogaster
Sequence 2:XP_005174003.1 Gene:ptpn4b / 407634 ZFINID:ZDB-GENE-030131-6259 Length:935 Species:Danio rerio


Alignment Length:1264 Identity:268/1264 - (21%)
Similarity:437/1264 - (34%) Gaps:431/1264 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LLDTSSTVDC-TISSESKGQECLDNVCQRLLIQQPEFFGLRYLVKGKDKEDEFKWIDLERSLSRQ 90
            |||  :||.. .::.:.:||..||.|.:.|.:.:.::|||:.   ..|..|..:|:|..:.:.:|
Zfish    35 LLD--NTVQTFRVNKQDQGQILLDVVYKHLELTERDYFGLQL---ADDTSDTQRWLDPNKPVRKQ 94

  Fly    91 LEKYAAGPKIYLRVRHYVTTGVRHLSDEATRFYYFLQLKSDIYEGRIACDIRTAILLALYCRQAE 155
            | |..:...:..||:.:|....: |.:|.||:.||||||.||..||:.|...||:|||.|..|||
Zfish    95 L-KRPSPHNLRFRVKFFVGDPGK-LQEEYTRYLYFLQLKQDILSGRLPCPQNTAVLLASYAVQAE 157

  Fly   156 YDSYQGDKQSKDYLKKSLVLPRNMQGLANDDSMLEGLIVEVLQQQAGIAHLSQSQAEEMYIQCCQ 220
            ...|...:....||.:...:|       |.....|..:.::.|:..|   |:.:|:|..|:...:
Zfish   158 LGDYSHSEHLSGYLSEYSFIP-------NPPQDFEKEVAKLHQEHNG---LTPAQSEFNYLNAAR 212

  Fly   221 QLEGYGEERFAAKDTLGNDLLLGLAINGMVVNADNGR-QYFPWKEFHTVTIDKRT----IKIEQN 280
            .||.||.|...|:|....::.:|:...|:.|..|..| .:|||  |..|.|..::    |::.:.
Zfish   213 TLELYGVELHYARDHCNTEIYVGVLSAGISVYKDRVRVNHFPW--FKIVKISFKSKQFFIQLRKE 275

  Fly   281 KLDGGGSIVGSFIFSEADTARYFWKLTISQHKFFKRYIDTATPS---------SLGSGADAESGP 336
            ..:...|::| |........:..||..:..|.||:  ::...|.         :|||        
Zfish   276 LTECRESLLG-FNMMNYRACKNLWKSCVENHTFFR--LERPVPPERNLFLHYFTLGS-------- 329

  Fly   337 LGVDSVGYVDYDYNEAAAAEQLQQHHQQQQHMQQQQQIQQQQMISSNISLATSANQMLGQSSSCL 401
                     .:.|.....|:.:|...::..              .:.:...:.:..::.:..|.|
Zfish   330 ---------KFRYCGRTEAQSVQYGKERGN--------------KNRVFARSPSKPLVRRLMSGL 371

  Fly   402 D---LSNNNLHSSSGMLHHGGSNNNNNNDERERLKAMLPTYRP--APDYETAVQLKYRTPSAEFH 461
            |   :|.|:|                 :|:|...:: ||...|  :||:..:|   :.|..|...
Zfish   372 DWETVSRNSL-----------------SDDRLETQS-LPNRSPPDSPDHSNSV---FTTEGARIR 415

  Fly   462 NVALAMAAPGNAYYAGSQPDVHNPGMHNENLLYGHMTAHRYPDVAQPAAALHHHINLYQAQHQPQ 526
            ..::                             ||:..|...|                      
Zfish   416 PSSI-----------------------------GHLVDHVIDD---------------------- 429

  Fly   527 SHPQPMSPAQAYLELSQRMHMMRHK-APPPYVNRLSSSSTPDLAVATPRPLQGFRNYVSGSSPDL 590
                  ||.|.:         ..|| |.....|.:|..|||                    |||:
Zfish   430 ------SPCQTF---------TNHKSASSTQANSISLDSTP--------------------SPDV 459

  Fly   591 VSNRTLFNGGQYVALPAGGHAGNIPTSSGATMLHQYQYVSHMGHSQPYLPPHGTFENLNMIEEQP 655
            .:                                                           :|||
Zfish   460 TT-----------------------------------------------------------DEQP 465

  Fly   656 SIMSQLRQSAMSQAAAAAAGSVVTQSSPTLPPSGYRSSVPPPASSPLPPPVVASSHKSATPAPLQ 720
                                       |.|||..:|       ..||       :|...:.:  |
Zfish   466 ---------------------------PALPPKQFR-------KDPL-------NHNGRSQS--Q 487

  Fly   721 RSL-VNGSIEPIYENVPLPQRASGGSSGAANTEAMRQRASSIQSAPGVVPVPAARNASSNNVVTV 784
            ..| .:..:..:| |||                     |:|.:|..|.||        .:|:|.:
Zfish   488 HELDDHDHLSELY-NVP---------------------AASGKSMNGAVP--------HDNLVLI 522

  Fly   785 TVNSPPDDG----NIKKYGADRAASTELLFLEPQAPKRTNRAASAAP-DMGATPPPRQHRSTASL 844
            .:. |.::|    |:|. |.|:           :.|...:|.|...| ||..   ||       |
Zfish   523 KMR-PDENGRFGFNVKG-GVDQ-----------RMPIIVSRVAPGTPADMCV---PR-------L 564

  Fly   845 NKSSTVDMITPAGDTLQQQFSAMNLSANTSASTSSMFNSTLDTTSSSA-------ASKDLKRKKR 902
            |:...|.:|           :..::|.:|......:..::.:..|...       |..|:..::.
Zfish   565 NEGDQVVLI-----------NGRDISDHTHDDVVMIIKASCEDQSGELILLVRPNAIYDVDEEQE 618

  Fly   903 WNFLSRSKTPDKQKSATLGREKATTAGQHSKLAAKLKLAQDDLNLPNRWSTGVNKPQPISGRYSK 967
                                              ||.|..|...:|.  :.|:..........|.
Zfish   619 ----------------------------------KLDLEPDFQYIPE--ACGLESHSEADSLRSS 647

  Fly   968 DKLCQILDQKLSDSQLFMEFERIPKRREHALYECALLEENEPKNHDPNFLPYDDNRVRLTPCRDN 1032
               .|:|...|:...:..:|:::.::|......||.|.:|..||...:..|||..||.|....| 
Zfish   648 ---IQLLRDGLASGTVPAQFDQLYRKRPGMSMSCARLPQNVSKNRYRDISPYDSTRVVLKGTED- 708

  Fly  1033 RHGYVNASSISATVGTK--QRFYIVAQSPQEPLTMRIFWQCVWEADVYLVVQLTEDM-------- 1087
               |:||:.|:..|.:|  .|.||..|.|. |.|...|||.|||....|||.||..:        
Zfish   709 ---YINANFINMDVPSKGEVRRYIACQGPL-PGTCSDFWQMVWEQSAALVVMLTTQVERGRVKCH 769

  Fly  1088 SYIPRNSHQRLEFGQFQVYQEFSQTTDRCTTIKLRLYHVPSRRYRSVWYLQYADWAEQNCPRDVN 1152
            .|.| |......:|.|||.....:.........|.|.|:.|:..|.:..:||..|.:...|.|.:
Zfish   770 QYWP-NVSASGTYGGFQVTCVSEEGNSAYLLRDLTLTHLESKEERQICQMQYLAWPDHGVPDDSS 833

  Fly  1153 HFLDFLEELNSVRLASTQEVPPGHNTNPPVLLHCLEGGGRSGVTLTADLLLYTLDHNED---LDI 1214
            .||:|:.::.|.|....:          ||::||..|.||:||.:|.:..:..::..:.   |||
Zfish   834 DFLNFVSQVRSKRADGPE----------PVVVHCSAGIGRTGVLITMETAMCLIEGGQSVYPLDI 888

  Fly  1215 PRVIGQLRHQRDSIIPSLAQYKFIYNLLI 1243
            .|.   :|.||..:|.:.:||:|:...::
Zfish   889 VRT---MRDQRAMMIQTPSQYRFVCEAIL 914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PezNP_001260127.1 B41 26..230 CDD:214604 65/203 (32%)
FERM_N 26..93 CDD:286467 20/66 (30%)
FERM_M 114..230 CDD:278785 41/115 (36%)
FERM_C_PTPN14_PTPN21 225..317 CDD:270009 25/96 (26%)
Y_phosphatase 1007..1243 CDD:278528 77/248 (31%)
PTPc 1009..1243 CDD:238006 76/246 (31%)
ptpn4bXP_005174003.1 B41 30..222 CDD:214604 65/203 (32%)
FERM_N 33..97 CDD:286467 20/67 (30%)
FERM_B-lobe 122..214 CDD:271216 34/101 (34%)
FERM_C_PTPN4_PTPN3_like 216..310 CDD:270010 25/98 (26%)
FA 325..365 CDD:285894 6/70 (9%)
PDZ_signaling 519..606 CDD:238492 22/120 (18%)
PTPc 662..915 CDD:214550 82/272 (30%)
PTPc 687..914 CDD:238006 76/245 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0792
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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