DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pez and ptpn4a

DIOPT Version :9

Sequence 1:NP_001260127.1 Gene:Pez / 33882 FlyBaseID:FBgn0031799 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_001007201.1 Gene:ptpn4a / 368448 ZFINID:ZDB-GENE-030616-449 Length:921 Species:Danio rerio


Alignment Length:1278 Identity:266/1278 - (20%)
Similarity:439/1278 - (34%) Gaps:430/1278 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RQYNVTSKSLF-------VISVHHLLDTSSTVD-CTISSESKGQECLDNVCQRLLIQQPEFFGLR 66
            |.|||.:..|.       |:....|||  :||. ..::...:||..||.|.:.|.:.:.::|||.
Zfish    11 RSYNVRTTELARDRQRTEVVCNILLLD--NTVQPFKVNKHDQGQILLDAVFKHLELTERDYFGLH 73

  Fly    67 YLVKGKDKEDEFKWIDLERSLSRQLEKYAAGPKIYLRVRHYVTTGVRHLSDEATRFYYFLQLKSD 131
            .   ..:..|..:|:|..:.:.:|| |..:...:..||:.:| :....|.:|.||:.||||:|.|
Zfish    74 L---ADEPSDSPRWLDPNKPIRKQL-KRGSPHHLNFRVKFFV-SDPNKLQEEYTRYQYFLQIKQD 133

  Fly   132 IYEGRIACDIRTAILLALYCRQAEYDSYQGDKQSKDYLKKSLVLPRNMQGLANDDSMLEGLIVEV 196
            |..||:.|...||.|||.|..|:|...|...:....||.:...:|...||...|       :.:.
Zfish   134 ILSGRLPCPHNTAALLASYAVQSELGDYSEAENLPGYLSEFFFIPNQPQGFEKD-------VAKH 191

  Fly   197 LQQQAGIAHLSQSQAEEMYIQCCQQLEGYGEERFAAKDTLGNDLLLGLAINGMVVNADNGR-QYF 260
            .||..|   |:.:|:|..|:...:.|:.||.|...|:|....::.:|:...|:.:..:..| .||
Zfish   192 HQQHNG---LNPAQSEFNYLNTARTLDLYGVELHYARDQSNTEIYVGVLSAGIGIYKNRVRINYF 253

  Fly   261 PWKEFHTVTIDKRT--IKIEQNKLDGGGSIVGSFIFSEADTARYFWKLTISQHKFFKRYIDTATP 323
            ||.:...::...:.  |::.:...|...:::| |........:..||..:..|.||:  :|...|
Zfish   254 PWLKIVKISFKCKQFFIQLRKEAHDTRDTLLG-FNMVNYRACKNLWKTCVEHHTFFR--LDRPVP 315

  Fly   324 S---------SLGSGADAESGPLGVDSVGYVDYDYNEAAAAEQLQQHHQQQQHMQQQQQIQQQQM 379
            .         ||||                 .:.|.....|:.:|        ..:::.|:.:..
Zfish   316 PQKNFFAHYFSLGS-----------------RFRYCGRTEAQSVQ--------YGKEKGIKDRVF 355

  Fly   380 ISSNISLATSANQMLGQSSSCLD---LSNNNLHSSSGMLHHGGSNNNNNNDERERLKA-MLPTYR 440
            .|..:     |.:::|.:    |   :|.|:|                   ..|||:. .|||..
Zfish   356 ASKPL-----ARKLMGVT----DWEAVSRNSL-------------------SEERLETRSLPTRS 392

  Fly   441 PAPDYETAVQLKYRTPSAEFHNVALAMAAPGNAYYAGSQPDVHNPGMHNENLLYGHMTAHRYPDV 505
            |                                           ||..|.|.|:           
Zfish   393 P-------------------------------------------PGTPNHNSLF----------- 403

  Fly   506 AQPAAALHHHINLYQAQHQPQSHPQPMSPAQAYLELSQRMHMMRHKAPPPYVNRLSSSSTPDLAV 570
                           .|..|:..|..|                                      
Zfish   404 ---------------VQEGPRLRPSSM-------------------------------------- 415

  Fly   571 ATPRPLQGFRNYVSGSSPDLVSNRTLFNGGQYVALPAGGHAGNIPTSSGATMLHQYQYVSHMGHS 635
                                                  ||                 .|.|:.|:
Zfish   416 --------------------------------------GH-----------------LVDHVIHA 425

  Fly   636 QPYLPPHGTFENLNMIEEQPSIMSQLRQSAMSQAAAAAAGSVVTQSSPTLPPSGYRSSVPPPASS 700
            .|.||   .|.|                  ...|::..|.|:..:|:|:  |.|...  ||||  
Zfish   426 SPSLP---VFSN------------------HKSASSTQANSISLESTPS--PEGVEG--PPPA-- 463

  Fly   701 PLPPPVVASSHKSATPAPLQRSL--VNGSIEPIYENVPLPQRASGGSSGAANTEAMRQRASSIQS 763
             |||   ..|.|:.:...|..|.  ::..|..:|: ||           .|..:.|..       
Zfish   464 -LPP---KQSRKNLSQLILSHSQQDLDNHINEMYD-VP-----------TATDKVMPN------- 505

  Fly   764 APGVVPVPAARNASSNNVVTVTVNSPPDDG----NIKKYGADRAASTELLFLEPQAPKRTNRAA- 823
              ||||        .:|:|.:.: .|.::|    |:|. |:|:           :.|...:|.| 
Zfish   506 --GVVP--------HDNLVLIKM-KPDENGRFGFNVKG-GSDQ-----------KMPIIVSRVAP 547

  Fly   824 SAAPDMGATPPPRQHRSTASLNKSSTVDMITPAGDTLQQQFS---AMNLSANTSASTSSMF---- 881
            ..:.|:..   ||       ||:...|.:|.  |..:.:...   .|.:.|:..:.:..:.    
Zfish   548 GTSADLCV---PR-------LNEGDQVVLIN--GREIAEHSHDQVVMFIKASCESHSGELILLVR 600

  Fly   882 -NSTLDTTSSSAASKDLKRKKRWNFLSRSKTPDKQKSATLGREKATTAGQHSKLAAKLKLAQDDL 945
             |:..|.......::                ||.|...    ||:.|...|        |.||  
Zfish   601 PNAIYDVVEEKLETE----------------PDFQYIP----EKSPTDPSH--------LDQD-- 635

  Fly   946 NLPNRWSTGVNKPQPISGRYSKDKLCQILDQKLSDSQLFMEFERIPKRREHALYECALLEENEPK 1010
                .|               :|.:. .|.:.|:...:..:|:::.::|......||.|.:|..|
Zfish   636 ----AW---------------RDSML-YLKEGLNSGTILAQFDQLYRKRPGMTMSCAKLPQNISK 680

  Fly  1011 NHDPNFLPYDDNRVRLTPCRDNRHGYVNASSISATVGTKQRF--YIVAQSPQEPLTMRIFWQCVW 1073
            |...:..|||..||.|....|    |:||:.|:..:......  ||..|.|. |.|...|||..|
Zfish   681 NRYRDISPYDATRVILKGTED----YINANYINMEIPACSLINRYIACQGPL-PNTCSDFWQMTW 740

  Fly  1074 EADVYLVVQLTEDM---SYIPRNSHQRLEFGQFQVYQEFSQTTDRCTTIKLRLYHVPSRRYRSVW 1135
            |....:||.||..:   .|.| |......:|.||:..:..:........::.|.|:.|...|.:.
Zfish   741 EQGSSMVVMLTTQVKCHQYWP-NPSGSATYGGFQISCQTEEGNSAFLVREITLTHIESGESRELT 804

  Fly  1136 YLQYADWAEQNCPRDVNHFLDFLEELNSVRLASTQEVPPGHNTNPPVLLHCLEGGGRSGVTLTAD 1200
            .:||..|.:...|.|...||||:..:.:.|....:          ||::||..|.||:||.:|.:
Zfish   805 QIQYLAWPDHGVPDDSTDFLDFVALVRNKRAGKDE----------PVVVHCSAGIGRTGVLITME 859

  Fly  1201 LLLYTLDHNEDLDIPRVIGQLRHQRDSIIPSLAQYKFIYNLLI 1243
            ..:..::.::.:....::..:|.||..:|.:.:|:||:...::
Zfish   860 TAMCLMECSQPVFPLEIVRTMRDQRAMMIQTPSQFKFVCEAIL 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PezNP_001260127.1 B41 26..230 CDD:214604 63/204 (31%)
FERM_N 26..93 CDD:286467 19/67 (28%)
FERM_M 114..230 CDD:278785 40/115 (35%)
FERM_C_PTPN14_PTPN21 225..317 CDD:270009 21/94 (22%)
Y_phosphatase 1007..1243 CDD:278528 66/240 (28%)
PTPc 1009..1243 CDD:238006 65/238 (27%)
ptpn4aNP_001007201.1 B41 30..222 CDD:214604 63/208 (30%)
FERM_N 33..97 CDD:286467 19/69 (28%)
FERM_B-lobe 122..214 CDD:271216 34/101 (34%)
FERM_C_PTPN4_PTPN3_like 216..310 CDD:270010 21/96 (22%)
FA 325..364 CDD:285894 10/68 (15%)
PDZ_signaling 513..600 CDD:238492 20/111 (18%)
PTPc 653..903 CDD:214550 71/266 (27%)
PTPc 680..902 CDD:238006 65/237 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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