DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pez and Ptp10D

DIOPT Version :10

Sequence 1:NP_609013.1 Gene:Pez / 33882 FlyBaseID:FBgn0031799 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_996413.2 Gene:Ptp10D / 32115 FlyBaseID:FBgn0004370 Length:1990 Species:Drosophila melanogaster


Alignment Length:332 Identity:81/332 - (24%)
Similarity:139/332 - (41%) Gaps:62/332 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   941 AQDDLNLPNRWSTGVNKPQPI-----SGRY---SKDKLCQILDQKLSDSQLFMEFERIPKRREHA 997
            |.|:::||:   :.:.:.:||     :..|   |.|          ||.:...|||.:.......
  Fly  1235 ANDNMSLPD---SVIEQNRPILIKNFAEHYRLMSAD----------SDFRFSEEFEELKHVGRDQ 1286

  Fly   998 LYECALLEENEPKNHDPNFLPYDDNRVRLTPCRDNR-HGYVNASSISATVGTKQRFYIVAQSPQE 1061
            ....|.|..|.|||...|.||||.:|.:|.|..|:. ..|:||:.:..  ....|.:||.|.|..
  Fly  1287 PCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPG--HNSPREFIVTQGPLH 1349

  Fly  1062 PLTMRIFWQCVWEADVYLVVQLTEDM--------SYIPRNSHQRLEFGQFQV-------YQEFSQ 1111
            . |...||:..||::...:|.||...        .|.| |....:.:|..:|       |.::..
  Fly  1350 S-TRDDFWRMCWESNSRAIVMLTRCFEKGREKCDQYWP-NDTVPVFYGDIKVQILNDSHYADWVM 1412

  Fly  1112 TTDR-CTTIKLRLYHVPSRRYRSVWYLQYADWAEQNCPRDVNHFLDFLEELNSVRLASTQEVPPG 1175
            |... |...:.|:       .|...:..:.|:...|.|:.:..|:....:    |:.:.|.    
  Fly  1413 TEFMLCRGSEQRI-------LRHFHFTTWPDFGVPNPPQTLVRFVRAFRD----RIGAEQR---- 1462

  Fly  1176 HNTNPPVLLHCLEGGGRSGVTLTADLLLYTLDHNEDLDIPRVIGQLRHQRDSIIPSLAQYKFIYN 1240
                 |:::||..|.||||..:|.|.:|..::.::.:||..::..:|.:|..::.:..||..|:.
  Fly  1463 -----PIVVHCSAGVGRSGTFITLDRILQQINTSDYVDIFGIVYAMRKERVWMVQTEQQYICIHQ 1522

  Fly  1241 LLITYLK 1247
            .|:..|:
  Fly  1523 CLLAVLE 1529

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PezNP_609013.1 FERM_F1_PTPN14_like 17..107 CDD:340619
FERM_M 112..230 CDD:459788
FERM_C_PTPN14_PTPN21 225..317 CDD:270009
PTP_DSP_cys 1036..1246 CDD:475123 51/225 (23%)
Ptp10DNP_996413.2 fn3 124..205 CDD:394996
fn3 220..304 CDD:394996
FN3 278..>734 CDD:442628
FN3 583..671 CDD:238020
fn3 787..850 CDD:394996
fn3 866..935 CDD:394996
fn3 959..1043 CDD:394996
PTP_tm 1083..1187 CDD:465889
R3-PTPc 1301..1522 CDD:350396 59/244 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.