DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pez and Ptpn4

DIOPT Version :9

Sequence 1:NP_001260127.1 Gene:Pez / 33882 FlyBaseID:FBgn0031799 Length:1252 Species:Drosophila melanogaster
Sequence 2:XP_017454155.1 Gene:Ptpn4 / 246116 RGDID:620712 Length:933 Species:Rattus norvegicus


Alignment Length:1287 Identity:265/1287 - (20%)
Similarity:429/1287 - (33%) Gaps:434/1287 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RQYNVTSKSLFVISVH-----HLLDTSSTVDC-TISSESKGQECLDNVCQRLLIQQPEFFGLRYL 68
            |.|||.:..|.....|     ::|...:||.. .::...:||..||.|.:.|.:.:.::|||:. 
  Rat    11 RTYNVRASELARDRQHTEVVCNILLLDNTVQAFRVNKHDQGQVLLDIVFKHLDLTERDYFGLQL- 74

  Fly    69 VKGKDKEDEFKWIDLERSLSRQLEK-----YAAGP-KIYLRVRHYVTTGVRHLSDEATRFYYFLQ 127
              ..|..|..:|:|..:.:.:||:|     ....| .:..||:.:| :....|.:|.||:.||||
  Rat    75 --ADDSTDNPRWLDPNKPIRKQLKKLFLLILGGSPYNLNFRVKFFV-SDPNKLQEEYTRYQYFLQ 136

  Fly   128 LKSDIYEGRIACDIRTAILLALYCRQAEYDSYQGDKQSKDYLKKSLVLPRNMQGLANDDSMLEGL 192
            :|.||..||::|...||.|||.:..|:|...|...:....||.....:|...|....:       
  Rat   137 IKQDILTGRLSCPCNTAALLASFAVQSELGDYNQSENLAGYLSDYSFIPNQPQDFEKE------- 194

  Fly   193 IVEVLQQQAGIAHLSQSQAEEMYIQCCQQLEGYGEERFAAKDTLGNDLLLGLAINGMVVNADNGR 257
            |.::.||..|   ||.::||..|:...:.||.||.|...|:|...|::|:|:...|:::..:..|
  Rat   195 IAKLHQQHIG---LSPAEAEFNYLNTARTLELYGVEFHYARDQSNNEILIGVMSGGILIYKNRVR 256

  Fly   258 -QYFPWKEFHTVTIDKRTIKIEQNK-LDGGGSIVGSFIFSEADTARYFWKLTISQHKFFKRYIDT 320
             ..|.|.:...::...:...|:..| |......:..|........:..||..:..|.||:  :|.
  Rat   257 MNTFLWLKIVKISFKCKQFFIQLRKELHESRETLLGFNMVNYRACKTLWKACVEHHTFFR--LDR 319

  Fly   321 ATPS---------SLGSGADAESGPLGVDSVGYVDYDYNEAAAAEQLQQHHQQQQHMQQQQQIQQ 376
            ..|.         :||| .....|...|.||.|                                
  Rat   320 PLPPQKNFFAHYFTLGS-KFRYCGRTEVQSVQY-------------------------------- 351

  Fly   377 QQMISSNISLATSANQMLGQSSSCLDLSNNNLHSSSGMLHHGGSNNNNNNDERERLKAMLPT--- 438
                                                      |....|    ::|:.|..|:   
  Rat   352 ------------------------------------------GKEKAN----KDRVFARSPSKPL 370

  Fly   439 YRPAPDYETAVQLKYRTPSAEFHNVALAMAAPGNAYYAGSQPDVHNPGMHNENLLYGHMTAHRYP 503
            .|...|:|.                                  |....:.::.|           
  Rat   371 ARKLMDWEV----------------------------------VSRNSLSDDRL----------- 390

  Fly   504 DVAQPAAALHHHINLYQAQHQPQSHPQPMSPAQAYLELSQRMHMMRHKAPPPYVNRLSSSSTPDL 568
                                :.||.|.                    ::||...|..:||.|.: 
  Rat   391 --------------------ETQSLPS--------------------RSPPGTPNHRNSSFTQE- 414

  Fly   569 AVATPRPLQGFRNYVSGSSPDLVSNRTLFNGGQYVALPAGGHAGNIPTSSGATMLHQYQYVSHMG 633
                                           |..|...:.||                 .|.|:.
  Rat   415 -------------------------------GTRVRPSSVGH-----------------LVDHVV 431

  Fly   634 HSQPYLPPHGTFENLNMIEEQPSIMSQLRQSAMSQAAAAAAGSVVTQSSPT--LPPSGYRSSVPP 696
            |:.|                ....:|| |..:.:|     |.|:|.:|||:  .|..|...::||
  Rat   432 HTSP----------------SEDFVSQ-RSPSSTQ-----ANSIVLESSPSQETPEDGQPPALPP 474

  Fly   697 PASSPLPPPVVASSHKSATPAPLQRSLVNGSIEPIYENVPLPQRASGGSSGAANTEAMRQRASSI 761
            ..|.......:..||.       |:.|||.:.|..  :||                     :|..
  Rat   475 KQSKKNSWNQIHFSHS-------QQDLVNHTNESF--DVP---------------------SSPE 509

  Fly   762 QSAP-GVVPVPAARNASSNNVVTVTVNSPPDDG----NIKKYGADRAASTELLFLEPQAPKRTNR 821
            :|.| |.:|        .:|:|.:.: .|.::|    |:|. |.|:           :.|...:|
  Rat   510 KSTPNGGIP--------HDNLVLIKM-KPDENGRFGFNVKG-GYDQ-----------KMPVIVSR 553

  Fly   822 AASAAPDMGATPPPRQHRSTASLNKSSTVDMITPAGDTLQQQFSAMNLSANTSASTSS------- 879
            .|...|.....|         .||:...|.:|. ..|..:.....:.|....|....|       
  Rat   554 VAPGTPADLCVP---------RLNEGDQVVLIN-GRDIAEHTHDQVVLFIKASCERHSGELVLLV 608

  Fly   880 MFNSTLDTTSSSAASKDLKRKKRWNFLSRSKTPDKQKSATLGREKATTAGQHSKLAAKLKLAQDD 944
            ..|:..|.......|:                ||.|...    |||.....|          |||
  Rat   609 RPNAVYDVVEEKLESE----------------PDFQYIP----EKAPLDSVH----------QDD 643

  Fly   945 LNLPNRWSTGVNKPQPISGRYSKDKLCQILDQKLSDSQLFMEFERIPKRREHALYECALLEENEP 1009
            .:|                   ::.:.|:.:..::.:.| .:|:::.:::......||.|.:|..
  Rat   644 HSL-------------------RESMIQLAEGLITGTVL-AQFDQLYRKKPGMTMSCAKLPQNIS 688

  Fly  1010 KNHDPNFLPYDDNRVRLTPCRDNRHGYVNASSISATVGTKQ--RFYIVAQSPQEPLTMRIFWQCV 1072
            ||...:..|||..||.|....|    |:||:.|:..:.:..  ..||..|.|. |.|.:.|||..
  Rat   689 KNRYRDISPYDATRVLLKGNED----YINANYINMEISSSSIINQYIACQGPL-PHTCKDFWQMT 748

  Fly  1073 WEADVYLVVQLTEDM--------SYIPRNSHQRLEFGQFQVYQEFSQTTDRCTTIKLRLYHVPSR 1129
            ||....:||.||..:        .|.|..|... .:|.:||.....:........|:.|::....
  Rat   749 WEQGSSMVVMLTTQVERGRVKCHQYWPEPSGSS-SYGCYQVTCHSEEGNPAYIFRKMTLFNQEKN 812

  Fly  1130 RYRSVWYLQYADWAEQNCPRDVNHFLDFLEELNSVRLASTQEVPPGHNTNPPVLLHCLEGGGRSG 1194
            ..|.:..:||..|.:...|.|.:.||||:..:.:.| |..:|         |:::||..|.||:|
  Rat   813 ESRQLTQIQYTAWPDHGVPDDSSDFLDFVCHVRNKR-AGKEE---------PIIVHCSAGIGRTG 867

  Fly  1195 VTLTADLLLYTLDHNE---DLDIPRVIGQLRHQRDSIIPSLAQYKFIYNLLI 1243
            |.:|.:..:..::.|:   .|||.|.   :|.||..:|.:.:||:|:...::
  Rat   868 VLITMETAMCLIECNQPVYPLDIVRT---MRDQRAMMIQTPSQYRFVCEAIL 916

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PezNP_001260127.1 B41 26..230 CDD:214604 63/210 (30%)
FERM_N 26..93 CDD:286467 18/67 (27%)
FERM_M 114..230 CDD:278785 40/115 (35%)
FERM_C_PTPN14_PTPN21 225..317 CDD:270009 21/93 (23%)
Y_phosphatase 1007..1243 CDD:278528 71/248 (29%)
PTPc 1009..1243 CDD:238006 70/246 (28%)
Ptpn4XP_017454155.1 B41 30..229 CDD:214604 63/212 (30%)
FERM_C_PTPN4_PTPN3_like 223..317 CDD:270010 21/95 (22%)
FA 330..372 CDD:400882 13/120 (11%)
PDZ_signaling 522..609 CDD:238492 20/109 (18%)
PTP_DSP_cys 648..921 CDD:421693 77/289 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0792
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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