DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pez and sdf-9

DIOPT Version :9

Sequence 1:NP_001260127.1 Gene:Pez / 33882 FlyBaseID:FBgn0031799 Length:1252 Species:Drosophila melanogaster
Sequence 2:NP_508013.2 Gene:sdf-9 / 189901 WormBaseID:WBGene00004748 Length:345 Species:Caenorhabditis elegans


Alignment Length:312 Identity:78/312 - (25%)
Similarity:113/312 - (36%) Gaps:77/312 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   977 KLSDSQLFMEFERIPKRREHALYECALLEENEPKNHDPNFLPYDDNRVRLTPCRDNRHGYVNASS 1041
            ||.|:|..:. ||:..|.|..           .:|.....:|.....|||||...||.||:|||.
 Worm    13 KLDDNQPLLS-ERVTARLEAV-----------NRNRVVKIVPQHRYNVRLTPSMLNRDGYINASL 65

  Fly  1042 IS-ATVGTKQRFYIVAQSPQEPLTMRIFWQCVWEADVYLVVQLTEDM--------SYIPRN---- 1093
            :. :.||.|   ||:...|.|.... .|||.|.|.....::|..:::        .|.|..    
 Worm    66 MEFSDVGQK---YILTGIPSEDKVF-AFWQMVLEQRSPTIIQFADNVEEKLEHYDKYFPDKGDVW 126

  Fly  1094 --SHQRLEFGQFQVYQEFSQTTDRCTTIKLRLYHVPSRRYRSVWYLQYADWAEQNCPRDVNHFLD 1156
              .|.::|...:.::|....|.:    ..||..:...|    |.:.....|.|...|    ...|
 Worm   127 SYGHLQVERKSYAIHQGNFHTRN----FILRKGNETHR----VLHFTVFGWTETTTP----IMQD 179

  Fly  1157 FLE---------ELNSVRLASTQ---------EVPPGHNTNPPVLLHCLEGGGRSGVTLTADLLL 1203
            ||.         .||.:..||..         ..||..   .|: :....|..|:|..:..|||:
 Worm   180 FLALRKVMKDTGALNMINPASALFRSTMRRYIHTPPSF---API-IQSARGSSRAGAFVVIDLLI 240

  Fly  1204 YTLDHN-------EDLDIPRVIGQLRHQRDSIIPSLAQYKFIYNLLITYLKR 1248
            ..:|..       |||     |.:.:|.|...:|....:.|||..::.||.|
 Worm   241 RMIDGKKTNLYSVEDL-----IVKCKHMRIHCVPVALHHSFIYEAVLDYLLR 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PezNP_001260127.1 B41 26..230 CDD:214604
FERM_N 26..93 CDD:286467
FERM_M 114..230 CDD:278785
FERM_C_PTPN14_PTPN21 225..317 CDD:270009
Y_phosphatase 1007..1243 CDD:278528 67/275 (24%)
PTPc 1009..1243 CDD:238006 67/273 (25%)
sdf-9NP_508013.2 PTPc 7..283 CDD:214550 75/306 (25%)
PTPc 34..283 CDD:304379 67/273 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D144506at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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