Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005263415.1 | Gene: | RAPGEF2 / 9693 | HGNCID: | 16854 | Length: | 1701 | Species: | Homo sapiens |
Alignment Length: | 1748 | Identity: | 614/1748 - (35%) |
---|---|---|---|
Similarity: | 836/1748 - (47%) | Gaps: | 486/1748 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 34 LHQKCNR--GSHSSDTSSAYSGSDTMASNY-ASSLEAEEIDLSGLVESVVDS----DEEDLAESM 91
Fly 92 DSLTVRDAVRDCLEKDPAERSEEDVEVLLEFTQGLKAFTNITLAVRRALCSVMVFAVVDKAGTVV 156
Fly 157 MSDGEELDSWSVLINGAVEIEHANGSREELQMGDSFGILPTMDKLYHRGVMRTKCDDCQFVCITQ 221
Fly 222 TDYYRIQHQGEENTRRHEDENGFVVMVTELRSIGGAGTDSAGSGGSATGASASLNMKRGHVVIRG 286
Fly 287 TPERLLQQLVEENSMTDPTYVEDFLLTHRIFIQNPQEVTSKLLHWFDLEQVDAHKTQELRDRVTR 351
Fly 352 VVLLWVNNHFTDFEADYEMMEFLEVFEALLERKKLLSQLRLLHIACAAKARMRSCTLTRSSRDEP 416
Fly 417 LNFRIVGGYELRGVAIATGNAAVGIYISHVEPGSKAQDVGLKRGDQIHEVNGQSLDHVTSKRALE 481
Fly 482 ILTGTTHLSISVKSNLLGFKEIMQALEHGGGTAGSGSISAGSGSFKSVRSPRRICANDIAKLHGR 546
Fly 547 SDSTTDELSSVSASNRAHMVRLSSVDMLLDQPDCAPPQTPPVSGSGNMASNFMQQL--LQSVNNS 609
Fly 610 SAKKSGGNSNSDQQDTKGGFMTLAPKRRLQKALAKMNL-------LNKQNHGSSLNDSSDTLLND 667
Fly 668 PKSKLSAVSSCSSSTQSSINGCTVSGGGRLYQSQSNPDLTSLNYDGGSDAGGNGGGRLQVNYLNA 732
Fly 733 HIHRPSAASTLTTNSTQSHLLPDYPDHVLKVYKADQTCKYVLIYKETTAHEVVMLTLQEFGIHDP 797
Fly 798 SSNFSLCEVSVGDGGMVKQRRLPDQLQNLAERISFAARYYLKLNDSTEPLVPDELALELVRESNV 862
Fly 863 HFLHLNAYELAIQLTLQDFANFRQIESTEYVDELFELRSRYGVPMLSKFAELVNREMFWVVSEIC 927
Fly 928 AEHNIVRRMKIVKQFIKIARHCKECRNFNSMFAIVSGLGHGAVSRLRQTWEKLPSKYQRLFNDLQ 992
Fly 993 DLMDPSRNMSKYRQLVSAELLAQHPIIPFYPIVKKDLTFIHLGNDTRVDGLINFEKLRMLAKEVR 1057
Fly 1058 LLTHMCSSPYDLLSILELKGQSPSNALFSLNQMSASQSNAAAGTV--IAANAGQATIKRRKKSTA 1120
Fly 1121 APNPKKMFEEAQMVRRVKAYLNSLKILSDEDLLHKFSLECEPAHGSTYSGSISHGNTSHRSGGGG 1185
Fly 1186 SISGGAGGSSGGGGGGSSSLNAGDQLSIYSHTSSSSAPNSSLSLRKRHPSSPTLSTTSSTSSTSD 1250
Fly 1251 HQRR--QMH--NNG--------------------PKFGTASPQAVKKMLSLSESSKIRPH----Q 1287
Fly 1288 PFVPRHGSTMAGVIPPLHHMHAAHGFSTPSPGGVVTSPATSAVANVQCTPSPSPC---------- 1342
Fly 1343 SHRRLASGGNIIPSRAI---HERSHSDTPAPPPPLPSVDLSLESSSV--TTFRDLPL-------- 1394
Fly 1395 RKSVT------------------------------------------------------------ 1399
Fly 1400 -------SGSISSCDSG-------YVHQQQ-------HYHLQY---------------------- 1421
Fly 1422 -----QQQQQQNSSQHEPSPPVYTAA----------DCRLLQQISNNAVTRNL-NSPCQSTNTPP 1470
Fly 1471 STPTPPPNQPTATIQLSAPPTAAAYMHARSQHQQLQQQQQSLAMPPPPPPPY-NVP----PLGSI 1530
Fly 1531 YSH--------------------HQGTAGSRHLNHMHGKTTGPQERWFPDCRPTTKQQ 1568 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | 70/108 (65%) |
RasGEFN | 279..400 | CDD:214571 | 71/120 (59%) | ||
PDZ_signaling | 404..494 | CDD:238492 | 41/89 (46%) | ||
DegQ | <422..494 | CDD:223343 | 32/71 (45%) | ||
PDZ_GEF_RA | 757..841 | CDD:176380 | 46/83 (55%) | ||
RasGEF | 871..1050 | CDD:279011 | 109/178 (61%) | ||
Rhomboid_SP | 1252..>1357 | CDD:289371 | 32/142 (23%) | ||
RAPGEF2 | XP_005263415.1 | CAP_ED | 37..143 | CDD:237999 | |
cNMP | 297..412 | CDD:197516 | 72/115 (63%) | ||
RasGEFN | 428..541 | CDD:214571 | 71/120 (59%) | ||
PDZ_signaling | 545..625 | CDD:238492 | 41/89 (46%) | ||
degP_htrA_DO | <565..689 | CDD:273938 | 59/204 (29%) | ||
RA_PDZ-GEF1 | 769..851 | CDD:340483 | 44/81 (54%) | ||
RasGEF | 874..1099 | CDD:238087 | 125/229 (55%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 239 | 1.000 | Domainoid score | I2286 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3629 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 882 | 1.000 | Inparanoid score | I402 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D21656at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002053 | |
OrthoInspector | 1 | 1.000 | - | - | otm41882 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104221 | |
Panther | 1 | 1.100 | - | - | O | PTHR23113 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2063 |
SonicParanoid | 1 | 1.000 | - | - | X1353 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
13 | 12.860 |