Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011238578.1 | Gene: | Rapgef2 / 76089 | MGIID: | 2659071 | Length: | 1657 | Species: | Mus musculus |
Alignment Length: | 1720 | Identity: | 615/1720 - (35%) |
---|---|---|---|
Similarity: | 848/1720 - (49%) | Gaps: | 449/1720 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 INRPEL----HQKCNR------------------------GSHSSDTSSAYSGSDTMASNY-ASS 64
Fly 65 LEAEEIDLSGLVESVVDS----DEEDLAESMDSLTVRDAVRDCLEKDPAERSEEDVEVLLEFTQG 125
Fly 126 LKAFTNITLAVRRALCSVMVFAVVDKAGTVVMSDGEELDSWSVLINGAVEIEHANGSREELQMGD 190
Fly 191 SFGILPTMDKLYHRGVMRTKCDDCQFVCITQTDYYRIQHQGEENTRRHEDENGFVVMVTELRSIG 255
Fly 256 GAGTDSAGSGGSATGASASLNMKRGHVVIRGTPERLLQQLVEENSMTDPTYVEDFLLTHRIFIQN 320
Fly 321 PQEVTSKLLHWFDLEQVDAHKTQELRDRVTRVVLLWVNNHFTDFEADYEMMEFLEVFEALLERKK 385
Fly 386 LLSQLRLLHIACAAKARMRSCTLTRSSRDEPLNFRIVGGYELRGVAIATGNAAVGIYISHVEPGS 450
Fly 451 KAQDVGLKRGDQIHEVNGQSLDHVTSKRALEILTGTTHLSISVKSNLLGFKEIMQALEHGGGTAG 515
Fly 516 SGSISAGSGSFKSVRSPRRICANDIAKLHGRSDSTTDELSSVSASNRAHMVRLSSVDMLLDQPDC 580
Fly 581 APPQTPPVSGSGNMASNFMQQL--LQSVNNSSAKKSGGNSNSDQQDTKGGFMTLAPKRRLQKALA 643
Fly 644 KMNL-------LNKQNHGSSLNDSSDTLLNDPKSKLSAVSSCSSSTQSSINGCTVSGGGRLYQSQ 701
Fly 702 SNPDLTSLNYDGGSDAGGNGGGRLQVNYLNAHIHRPSAASTLTTNSTQSHLLPDYPDHVLKVYKA 766
Fly 767 DQTCKYVLIYKETTAHEVVMLTLQEFGIHDPSSNFSLCEVSVGDGGMVKQRRLPDQLQNLAERIS 831
Fly 832 FAARYYLKLNDSTEPLVPDELALELVRESNVHFLHLNAYELAIQLTLQDFANFRQIESTEYVDEL 896
Fly 897 FELRSRYGVPMLSKFAELVNREMFWVVSEICAEHNIVRRMKIVKQFIKIARHCKECRNFNSMFAI 961
Fly 962 VSGLGHGAVSRLRQTWEKLPSKYQRLFNDLQDLMDPSRNMSKYRQLVSAELLAQHPIIPFYPIVK 1026
Fly 1027 KDLTFIHLGNDTRVDGLINFEKLRMLAKEVRLLTHMCSSPYDLLSILELKGQSPSNALFSLNQMS 1091
Fly 1092 ASQSNAAAGTV--IAANAGQATIKRRKKSTAAPNPKKMFEEAQMVRRVKAYLNSLKILSDEDLLH 1154
Fly 1155 KFSLECEPAHGSTYSGSISHGNTSHRSGGGGSISGGAGGSSGGGGGGSSSL--NAGDQLSIYSHT 1217
Fly 1218 SSSSAPNSSLSLRKRHPSSP--------TLSTTSSTSSTSDHQRRQM--HNNGPKFGTASPQAVK 1272
Fly 1273 KMLSLSESSKIRPHQPFVPRHGSTMAGVIPPLHHMHAAHGFSTPSPGGVVTSPATS-----AVAN 1332
Fly 1333 VQCTPSPSPCSHRRLASGGNIIPSR-------AIHE------------------RSHSDTPAPPP 1372
Fly 1373 PLPSVDLSLES-SSVTTFRDLPLRKSVTS------------------------GSISSCDSG--- 1409
Fly 1410 ----YVHQQQ-------HYHLQY---------------------------QQQQQQNSSQHEPSP 1436
Fly 1437 PVYTAADCRLLQQISNNAVT------RNLNSPCQSTNTPPST-----PTPPPNQ----PTATIQL 1486
Fly 1487 SA---------PPTAAAYM------------H-ARS--QHQQLQQQQQSLAMPPPPPPPYNVPPL 1527
Fly 1528 GSIYSHHQGTAGSRHLNHMHGKTTGPQERW 1557 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | 70/108 (65%) |
RasGEFN | 279..400 | CDD:214571 | 71/120 (59%) | ||
PDZ_signaling | 404..494 | CDD:238492 | 40/89 (45%) | ||
DegQ | <422..494 | CDD:223343 | 31/71 (44%) | ||
PDZ_GEF_RA | 757..841 | CDD:176380 | 46/83 (55%) | ||
RasGEF | 871..1050 | CDD:279011 | 109/178 (61%) | ||
Rhomboid_SP | 1252..>1357 | CDD:289371 | 31/111 (28%) | ||
Rapgef2 | XP_011238578.1 | CAP_ED | 37..143 | CDD:237999 | |
cNMP | 297..412 | CDD:197516 | 72/115 (63%) | ||
RasGEFN | 428..541 | CDD:214571 | 71/120 (59%) | ||
PDZ_signaling | 545..625 | CDD:238492 | 40/89 (45%) | ||
degP_htrA_DO | <565..689 | CDD:273938 | 58/204 (28%) | ||
RA_PDZ-GEF1 | 769..851 | CDD:340483 | 44/81 (54%) | ||
RasGEF | 874..1099 | CDD:238087 | 125/226 (55%) | ||
PHA03379 | <1522..>1643 | CDD:223066 | 28/122 (23%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 239 | 1.000 | Domainoid score | I2265 |
eggNOG | 1 | 0.900 | - | - | E1_KOG3629 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 875 | 1.000 | Inparanoid score | I406 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0002053 | |
OrthoInspector | 1 | 1.000 | - | - | otm43930 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104221 | |
Panther | 1 | 1.100 | - | - | O | PTHR23113 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2063 |
SonicParanoid | 1 | 1.000 | - | - | X1353 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
11 | 10.940 |