Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038935756.1 | Gene: | Rapgef3 / 59326 | RGDID: | 621869 | Length: | 1003 | Species: | Rattus norvegicus |
Alignment Length: | 1122 | Identity: | 267/1122 - (23%) |
---|---|---|---|
Similarity: | 412/1122 - (36%) | Gaps: | 390/1122 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 84 EEDLAESMDSLTVR--DAVRD-CLEKDPAERSEEDVEVLLEFTQGLKAFTNITLAVRRALCSVMV 145
Fly 146 FAVVDKAGTVVMSDGEELDSWSVLINGAVE-IEHANGSREELQMGDSFGILPTMDKLYHRGVMRT 209
Fly 210 KCDDCQFVCITQTDYYRIQHQGEENTRRHEDENGFVVMVTELRSIGGAGTDSAGSGGSATGASAS 274
Fly 275 LNMKRGHVVIRGTPERLLQQLVE----ENSMTDP--TYVEDFLLTHRIFIQNPQEVTSKLLHWFD 333
Fly 334 LEQVDAHKTQE---------LRDRVTRVVLLWVNNHFTDFEADYEMMEFLEVFEALLERKKLLSQ 389
Fly 390 LRLLHIACAAKARMRSCTLTRSSRDEPLNFRIVGGYELRGVAIATGNAAVGIYISHVEPGSKA-- 452
Fly 453 -----------------QDVGLKRGDQIHEVNGQSLDHVTSKRALEILTGTTHLSISVKSNLLGF 500
Fly 501 KEIMQALEHGGGTAGSGSISAGSGSFKSVRSPRRICAND--IAKLHGRSDSTTDELSSVSASNRA 563
Fly 564 HMVRLSSVDMLLDQPDCAPPQTPPVSGSGNMASNFMQQLLQSVNNSSAKKSGGNSNSDQQDTKGG 628
Fly 629 FMTLAPKRRLQKALAKMNLLNKQNHGSSLNDSSDTLLNDPKSKLSAVSSCSSSTQSSINGCTVSG 693
Fly 694 GGRLYQSQSNPDLTSLNYDGGSDAGGNGGGRLQVNYLNAHIHRPSAASTLTTNSTQSHLLPDYPD 758
Fly 759 HVLKVYKADQTCKYVLIYKETTAHEVVMLTLQEFGIHDPSSNFSLCEVSVGDGGMVKQRRLPDQL 823
Fly 824 QNLAERISFAARYYLKLNDSTEPLVPDELALELVRESNVHFLHLNAYELAIQLTLQD---FANFR 885
Fly 886 QIESTEYVDELFELRSRYGVPMLSKFAELVNREMFWVVSEICAEHNIVRRMKIVKQFIKIARHCK 950
Fly 951 ECRNFNSMFAIVSGLGHGAVSRLRQTWEKLPSKYQRLFNDLQDLMDPSRNMSKYRQLVSAELLAQ 1015
Fly 1016 HPIIPFYPIVKKDLTFIHLGNDTRVDGLINFEKLRMLAKEVRLLTHMCSSPYDLLSILELKGQSP 1080
Fly 1081 SNALFSLNQMSASQSNAAAGTVIAANAGQATIKRRKKSTAAPNPKKMFEEAQMVRRVKAYLNSLK 1145
Fly 1146 ILSDEDLLHKFSLECEP 1162 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | 32/109 (29%) |
RasGEFN | 279..400 | CDD:214571 | 39/135 (29%) | ||
PDZ_signaling | 404..494 | CDD:238492 | 19/108 (18%) | ||
DegQ | <422..494 | CDD:223343 | 17/90 (19%) | ||
PDZ_GEF_RA | 757..841 | CDD:176380 | 8/83 (10%) | ||
RasGEF | 871..1050 | CDD:279011 | 77/181 (43%) | ||
Rhomboid_SP | 1252..>1357 | CDD:289371 | |||
Rapgef3 | XP_038935756.1 | DEP_Epac | 131..254 | CDD:239884 | 10/24 (42%) |
CAP_ED | 278..387 | CDD:237999 | 31/108 (29%) | ||
RasGEF_N | 418..527 | CDD:395493 | 34/109 (31%) | ||
RasGEF | 738..1003 | CDD:214539 | 106/310 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |