Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009303357.1 | Gene: | rasgrf2a / 558859 | ZFINID: | ZDB-GENE-111128-1 | Length: | 1274 | Species: | Danio rerio |
Alignment Length: | 1281 | Identity: | 239/1281 - (18%) |
---|---|---|---|
Similarity: | 453/1281 - (35%) | Gaps: | 346/1281 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 65 LEAEEIDLSGLVESVVDSDEE---------DLAESMDSLTVRDAVRDCLEKDPAERSEEDVEVLL 120
Fly 121 EFTQGLKAFTNITLAVRRALCS----------VMVFAVVDKAGTVVMSDGEELDSWSVLINGAVE 175
Fly 176 IEH--ANGSREELQMGDSFGI------LPTMDKLYHRGVMRTKCDDCQFVCITQTDYYRI----Q 228
Fly 229 HQGEENTRRHEDENGFVVMVTELRSIGGAGTDSAGSGGSATGASASLNMKRGHVVIRGTPERLLQ 293
Fly 294 QLVEENSMTDPTYVEDFLLTHRIFIQNPQEVTSKLLHWFDLEQVDAHKTQELRDR----VTRVVL 354
Fly 355 LWVNNHFTDFEADYEMME--------FLEVFEALLE------RKKLLSQLRLLHIACAAKARMRS 405
Fly 406 CTLTRSSRDEPLNF--------RIVGGYELRGVAIATGNAAVGIYISHVEPGSKAQDVGLKRGDQ 462
Fly 463 IHEVNGQSLDHVTSKRALEILTGTTH----LSISVKSNLLGFKEIMQALEHGGGTAGSGSISAGS 523
Fly 524 GSFKSVRSPRRICANDIAKLHGRSDSTTDELSSVSASNRAHMVRLSSVDMLLDQPDCAPPQTPPV 588
Fly 589 SGSGNMASNFMQQLLQS----------------------------VNNSSAKKSGGNSNSDQQDT 625
Fly 626 KGGFMTLAPKRRLQKALAK-------MNLLNKQNHGS---------SLNDSSDTLLNDPKSKLSA 674
Fly 675 VSSC-------SSSTQSSING---------------CTVS--------------------GG--- 694
Fly 695 ------GRLYQSQSNPDLTSLNYD-------GGSDAGGNGGGRLQVNYLNAHIHRPS-------- 738
Fly 739 -----AASTLTTNSTQSHLLPDYPDHVLKVYKADQTCKYVLIYKETTAHEVVMLTLQEFGIHDPS 798
Fly 799 SNFSL-CEVSVGDGGMVKQ-RRLPDQL-QNLAERISFAARYYLKLNDSTEPLVPDELALELVRES 860
Fly 861 NVH-FLHLNAYELAIQLTLQDFANFRQIESTEYVDE-LFELRSRYGVPMLSKFAELVNREMFWVV 923
Fly 924 SEICAEHNIVRRMKIVKQFIKIARHCKECRNFNSMFAIVSGLGHGAVSRLRQTWEKLPSKYQRLF 988
Fly 989 NDLQDLMDPSRNMSKYRQLVSAELLAQHPIIPFYPIVKKDLTFIHLG--NDTRVDGLINFEKLRM 1051
Fly 1052 LAKEVRLLTHMCSSPYDLLSILELKGQSPSNALFSLNQMSASQSNAAAGTVIAANAGQATIKRRK 1116
Fly 1117 KSTAAPNPKKMFEEAQMVRRVKAYLNSLKILSDEDLLHKFSLECEP 1162 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | 19/130 (15%) |
RasGEFN | 279..400 | CDD:214571 | 29/138 (21%) | ||
PDZ_signaling | 404..494 | CDD:238492 | 22/101 (22%) | ||
DegQ | <422..494 | CDD:223343 | 17/75 (23%) | ||
PDZ_GEF_RA | 757..841 | CDD:176380 | 15/86 (17%) | ||
RasGEF | 871..1050 | CDD:279011 | 51/181 (28%) | ||
Rhomboid_SP | 1252..>1357 | CDD:289371 | |||
rasgrf2a | XP_009303357.1 | PH_RasGRF1_2 | 19..155 | CDD:270081 | 1/3 (33%) |
PH | 24..130 | CDD:278594 | |||
RhoGEF | 244..425 | CDD:279015 | 39/234 (17%) | ||
PH | 478..585 | CDD:214574 | 25/117 (21%) | ||
PH | 489..584 | CDD:278594 | 21/105 (20%) | ||
RasGEF_N | 635..>683 | CDD:279012 | 7/57 (12%) | ||
REM | <935..1007 | CDD:295342 | 15/79 (19%) | ||
RasGEF | 1033..1265 | CDD:238087 | 70/297 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |