Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_232315.7 | Gene: | Rasgef1a / 312664 | RGDID: | 1305836 | Length: | 489 | Species: | Rattus norvegicus |
Alignment Length: | 493 | Identity: | 106/493 - (21%) |
---|---|---|---|
Similarity: | 188/493 - (38%) | Gaps: | 131/493 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 697 LYQSQSNPDLTSLNYDG--------------GSDAGGNGGGRLQVNYLNAHIHRPSAASTLTTNS 747
Fly 748 TQS---HLLPD---YPDHVL--------KVY--------KADQTC-------------------- 770
Fly 771 -KYVLIYKETT-------AHEVVMLTLQEFGIHDPSSNFSLCEVSVGDGGMVKQRRLPDQLQNLA 827
Fly 828 ERISFAARYYL-KLNDSTEPLVPDE----LALELVRESNVHFLHLNAYELAIQLTLQDFANFRQI 887
Fly 888 ESTE------YVDELFELRSRYGVP---MLSKFAELVNREMFWVVSEICAEHNIVRRMKIVKQFI 943
Fly 944 KIARHCKECRNFNSMFAIVSGLGHGAVSRLRQTWEKLPSKYQRLFNDLQDLMDPSRNMSKYRQLV 1008
Fly 1009 --------SAELLAQHPIIPFYPIVKKDLTFIH-LGNDTRVDGLINFEKLRMLAKEV-------- 1056
Fly 1057 ---------RLLTHMCSSPY---DLLSILELKGQSPSN 1082 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | |
RasGEFN | 279..400 | CDD:214571 | |||
PDZ_signaling | 404..494 | CDD:238492 | |||
DegQ | <422..494 | CDD:223343 | |||
PDZ_GEF_RA | 757..841 | CDD:176380 | 24/128 (19%) | ||
RasGEF | 871..1050 | CDD:279011 | 57/196 (29%) | ||
Rhomboid_SP | 1252..>1357 | CDD:289371 | |||
Rasgef1a | XP_232315.7 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |