DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PDZ-GEF and CG7369

DIOPT Version :9

Sequence 1:NP_609012.2 Gene:PDZ-GEF / 33881 FlyBaseID:FBgn0265778 Length:1573 Species:Drosophila melanogaster
Sequence 2:NP_649415.2 Gene:CG7369 / 2768961 FlyBaseID:FBgn0037188 Length:680 Species:Drosophila melanogaster


Alignment Length:969 Identity:194/969 - (20%)
Similarity:309/969 - (31%) Gaps:384/969 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   253 SIGGAGTDSAGSGGSATGASASLNMKRGHVVIRGTPERLLQQLVEENSMTDPTYVEDFLLTHRIF 317
            |.||..:.:.|..||...|:.:||:|.....|.|.|.            |..:......:||:..
  Fly     4 SNGGLSSATNGRSGSTGSATINLNLKGHERTIVGVPG------------TGASSATTTSITHKTL 56

  Fly   318 IQNPQEVTSKLLHWFDLEQVDAHKTQELRDRVTRVVLLWVNNHFTDFEADYEMMEFLEVFEALLE 382
            .....:.::...|        ||::.....|:                             ||||
  Fly    57 PDLKTQRSNSACH--------AHESLSALRRI-----------------------------ALLE 84

  Fly   383 R--KKLLSQLRLLHIACAAKARMRSCTLTRSSRDEPLNF---RIVGGYELRGVAIATGNAAVGIY 442
            :  :||||.       .||::|:    |.:.:|::.|.:   |:..| .|:.:            
  Fly    85 KPPEKLLSY-------GAAQSRI----LGQEAREDFLVYSEGRLHSG-PLQSL------------ 125

  Fly   443 ISHVEPGSKAQDVGLKRGDQIHEV---NGQSLDHVTSKRALEILTGTTHLSISVKSNLLGFKEIM 504
            |:|:.|              .||.   .|.....:.|.|            :.|:.:.| ..:|.
  Fly   126 IAHMVP--------------THEYYPDEGFIFAFLLSAR------------LFVRPHEL-LAQIS 163

  Fly   505 QALEH-------GGGT---AGSG-----SISAGSGSFKSVRSPRRICANDIAKLHGRSDSTTDEL 554
            |..||       ||..   ||.|     .:|..|.|..:.|......|:..::|..|....|:..
  Fly   164 QTWEHQQQDVGTGGDVVDDAGQGPGRTMMVSINSASPLTQRKGSAAAASHSSELEPRLQQRTNTQ 228

  Fly   555 SSVSASNRAHMVRLSSV-----------DMLLDQPDCAPPQTPPVSGS-GNMASNFMQ------- 600
            .|..     |.:||.|.           :.|:.|......:...:..| |...|..:|       
  Fly   229 RSAQ-----HCIRLLSEWIEIFPYDFRDERLMQQVRILARKCVYIDNSLGKQVSRILQLLVSRLT 288

  Fly   601 ------QLLQSVNNSSAKKSGGNSNSDQQDTKGGFMTLAPKRRLQKALAKMNLLNKQNHG--SSL 657
                  :.||::::..|:       |.||.                        :..:||  :.|
  Fly   289 TLEQYEEFLQTISSEEAQ-------SQQQQ------------------------HHHHHGHHNHL 322

  Fly   658 NDSSDTLLNDPKSKLSAVSSCSSSTQSSINGCTVSGGGRLYQSQSNPDLTSLNYDGGSDAGGNGG 722
            :::..|.|               .:.|..||  .||||......||           |.:.|:  
  Fly   323 HNAFQTFL---------------GSSSHANG--ASGGGGSASGTSN-----------SSSSGH-- 357

  Fly   723 GRLQVNYLNAHIHRPSAASTLTTNSTQSHLLPDYPDHVLKVYKADQTCKYVLIYKETTAHEVVML 787
                          .|:|||..:.||...     ||.|..:.....:|.::       ||::..:
  Fly   358 --------------TSSASTSNSISTTPQ-----PDDVFGIMDMCPSCAHL-------AHQLTAI 396

  Fly   788 TLQEFGIHDPSSNFSLCEVSVGDGGMVKQRRLPDQLQNLAERISFAARYYLKLNDSTEPLVPDEL 852
            .|:...             .:|....|:               :||..|..:..|.:        
  Fly   397 ELERLS-------------HIGPEEFVQ---------------AFAKDYQQQAKDGS-------- 425

  Fly   853 ALELVRESNVHFLHLNAYELAIQLTLQDFANFRQIESTEYVDELFELRSRYGVPMLSKFAELVNR 917
                 ||:|..........     :|.|....|.:||                     :.:..||
  Fly   426 -----REANNSKCSGGGGG-----SLNDMKKTRNLES---------------------YVQWFNR 459

  Fly   918 EMFWVVSEICAEHNIVRRMKIVKQFIKIARHCKECRNFNSMFAIVSGLGHGAVSRLRQTWEKLPS 982
            ..:...|||.......:|::|::.:|:.||.|....||||:.||::||....:.||::||.|:.|
  Fly   460 LSYLTASEIVKYPKKKQRVRIIEYWIETARECFNIGNFNSLMAIIAGLNLAPIGRLKKTWAKVQS 524

  Fly   983 KYQRLFNDLQDLMDPSRNMSKYRQLVSAELL--------AQHPIIPFYPIVKKDLTFIHLGNDTR 1039
               ..|:.|:..|||:.|.:.||..:.|.:.        .:..||||:.:..|||.|::.|...|
  Fly   525 ---AKFSVLEHQMDPTSNFNSYRSTLKAAMWRSEGATEERERIIIPFFSLFVKDLYFLNEGCSNR 586

  Fly  1040 V-DGLINFEKLRMLAKEVRLLTHMCSSPYDLLSILELKGQSPSNALFSLNQMSASQSNAAAGTVI 1103
            : :..|||||...|||:|                :|.......|..|.                 
  Fly   587 LPNNHINFEKCSQLAKQV----------------MEFNEWKKVNCPFE----------------- 618

  Fly  1104 AANAGQATIKRRKKSTAAPNPKKMFEEAQMVRRVKAYLNSLKILSDEDLLHKFSLECEP 1162
                            ..||             |.|||.:..:| :|:.|...|.||||
  Fly   619 ----------------RLPN-------------VIAYLQNSAVL-NENTLSMASFECEP 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDZ-GEFNP_609012.2 CAP_ED 128..237 CDD:237999
RasGEFN 279..400 CDD:214571 19/122 (16%)
PDZ_signaling 404..494 CDD:238492 14/95 (15%)
DegQ <422..494 CDD:223343 10/74 (14%)
PDZ_GEF_RA 757..841 CDD:176380 12/83 (14%)
RasGEF 871..1050 CDD:279011 54/187 (29%)
Rhomboid_SP 1252..>1357 CDD:289371
CG7369NP_649415.2 RasGEF_N 116..261 CDD:279012 37/189 (20%)
RasGEF 388..649 CDD:214539 87/400 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467912
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR23113
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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