DRSC/TRiP Functional Genomics Resources

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Protein Alignment PDZ-GEF and RGL4

DIOPT Version :10

Sequence 1:NP_609012.2 Gene:PDZ-GEF / 33881 FlyBaseID:FBgn0265778 Length:1573 Species:Drosophila melanogaster
Sequence 2:NP_001316353.1 Gene:RGL4 / 266747 HGNCID:31911 Length:580 Species:Homo sapiens


Alignment Length:218 Identity:51/218 - (23%)
Similarity:92/218 - (42%) Gaps:39/218 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   872 LAIQLTLQDFANFRQIESTEYVDELF---ELR-SRYGVPMLSKFAELVNREMFWVVSEICAEHNI 932
            ||.||||.|...|:::...|.:..::   .|: :.:..|.:.......||....:.:....:|::
Human   223 LAEQLTLMDAELFKKVVLHECLGCIWGQGHLKGNEHMAPTVRATIAHFNRLTNCITTSCLGDHSM 287

  Fly   933 VR--RMKIVKQFIKIARHCKECRNFNSMFAIVSGLGHGAVSRLRQTWEKLPSKYQRLFNDL---- 991
            ..  |.::|:.:||:||.|....||:|:..|||.|....:.:|.:||..:.||..:...:|    
Human   288 RARDRARVVEHWIKVARECLSLNNFSSVHVIVSALCSNPIGQLHKTWAGVSSKSMKELKELCKKD 352

  Fly   992 ----QDLM-------------DPSRNMSKYRQLVSAELLAQHPIIPFYPIVKKDLTFIHLGNDTR 1039
                :||:             :|.|...:.|:       .:..::||......:|..:.......
Human   353 TAVKRDLLIKAGSFKVATQERNPQRVQMRLRR-------QKKGVVPFLGDFLTELQRLDSAIPDD 410

  Fly  1040 VDGLINFEKLRMLAKEVRLLTHM 1062
            :||..|     ..:||||:|..|
Human   411 LDGNTN-----KRSKEVRVLQEM 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDZ-GEFNP_609012.2 CAP_ED 128..237 CDD:237999
RasGEFN 279..400 CDD:214571
PDZ_RapGEF2_RapGEF6-like 404..496 CDD:467237
RA_PDZ-GEF1 759..841 CDD:340483
RasGEF 871..1050 CDD:459872 45/204 (22%)
RGL4NP_001316353.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 117..215
RasGEF 216..451 CDD:238087 51/218 (23%)
Blue background indicates that the domain is not in the aligned region.

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