Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001123140.1 | Gene: | rgl-1 / 180611 | WormBaseID: | WBGene00017891 | Length: | 880 | Species: | Caenorhabditis elegans |
Alignment Length: | 656 | Identity: | 134/656 - (20%) |
---|---|---|---|
Similarity: | 227/656 - (34%) | Gaps: | 228/656 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 778 ETTAHEVVMLTLQEF--GIHDPSSNFSLCEVSVGDGGMVK------------------------Q 816
Fly 817 RRLP--------------DQLQNLAERISFAARYYLKLNDSTEPLVPDELALELVRESNVHFLHL 867
Fly 868 NAYELAIQLTLQDFANFRQIESTEYVDELFELRSRYGVPM------LSKFAELVNREMFWVVSEI 926
Fly 927 CAEHNIVRRMKIVKQFIKIARHCKECRNFNSMFAIVSGLGHGAVSRLRQTWEKLPSKYQRLFNDL 991
Fly 992 QDL--MDPSRNMSKYRQLVSAE------LLAQHPIIPFYPIVKKDL-------TFIHLGN----- 1036
Fly 1037 --------DTRVDGLINFEKLR----MLAKEVRL-----------LTHMCSSPYDLLSILE---- 1074
Fly 1075 ----LKGQSPSNALFSLNQMSASQSNAAAGTVIAANAGQATIKRRKKSTAAPNPKKMFEEAQMVR 1135
Fly 1136 RVKAYLNSLKILSD------EDLLHKFSLECEPAHGSTYSG-------SISHGNTSHRSGGG--- 1184
Fly 1185 --------------GSISGGAGG----------SSGGGGGGSSSLNAG---------DQLSIYSH 1216
Fly 1217 TSSSSAPNSSLSLRKRHPSSPTLSTTSSTSSTSDHQRRQMHNNGPKFGTASPQAVKKMLSLSESS 1281
Fly 1282 KIRPHQ 1287 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | |
RasGEFN | 279..400 | CDD:214571 | |||
PDZ_signaling | 404..494 | CDD:238492 | |||
DegQ | <422..494 | CDD:223343 | |||
PDZ_GEF_RA | 757..841 | CDD:176380 | 15/102 (15%) | ||
RasGEF | 871..1050 | CDD:279011 | 52/212 (25%) | ||
Rhomboid_SP | 1252..>1357 | CDD:289371 | 8/36 (22%) | ||
rgl-1 | NP_001123140.1 | RasGEFN | 84..211 | CDD:214571 | 8/57 (14%) |
RasGEF | 254..515 | CDD:238087 | 62/264 (23%) | ||
UBQ | 752..843 | CDD:294102 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |