| Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_006497645.1 | Gene: | Rapgef1 / 107746 | MGIID: | 104580 | Length: | 1257 | Species: | Mus musculus |
| Alignment Length: | 614 | Identity: | 150/614 - (24%) |
|---|---|---|---|
| Similarity: | 239/614 - (38%) | Gaps: | 138/614 - (22%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 489 LSISVKSNLLGFKEIMQALEHGGGTAGSGSISAGSGSFKSVRSPRRICANDIAKLHGRSDSTTDE 553
Fly 554 LSSVSASNRAHM--VRLS-SVDMLLDQPDCAPPQTPPVSGSGNMASNFMQQLLQ-----SVNNSS 610
Fly 611 AKKSGGNSNSDQQDTKGGFMTLAPKRRLQKALAKMN---LLNKQNH-------GSSLNDSSDTLL 665
Fly 666 NDPKSKLSAVSSCSSSTQ----SSINGCTVSGGGRLYQSQSNPDLTSLNYDGGSDAGGNGGGRLQ 726
Fly 727 VN-----------YLNAHIHRPSAASTLTTNSTQSHLLPDYPDHVLK--VYKADQTCKYVLIYKE 778
Fly 779 TTAHEVVMLTLQEFGIHDPSSNFSLCE-------------VSVGDGGMVKQRRLPDQLQNLAERI 830
Fly 831 SFAARYYLKLNDSTEPLVPDELALELVRESNVHFLHLNAYELAIQLTLQDFANFRQIESTE---Y 892
Fly 893 VDELFELRSRYGVPMLSKFAELVNREMFWVVSEICAEHNIVRRMKIVKQFIKIARHCKECRNFNS 957
Fly 958 MFAIVSGLGHGAVSRL---RQTWEKLPSKYQRLFNDLQDLMDPSRNMSKYRQLVSAELLAQHPII 1019
Fly 1020 PFYPIVKKDLTFIHLGNDTRVDGLINFEK 1048 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | |
| RasGEFN | 279..400 | CDD:214571 | |||
| PDZ_signaling | 404..494 | CDD:238492 | 3/4 (75%) | ||
| DegQ | <422..494 | CDD:223343 | 3/4 (75%) | ||
| PDZ_GEF_RA | 757..841 | CDD:176380 | 12/98 (12%) | ||
| RasGEF | 871..1050 | CDD:279011 | 66/184 (36%) | ||
| Rhomboid_SP | 1252..>1357 | CDD:289371 | |||
| Rapgef1 | XP_006497645.1 | PHA03247 | <227..337 | CDD:223021 | |
| PHA03307 | 678..>878 | CDD:223039 | 48/222 (22%) | ||
| RasGEFN | 868..1009 | CDD:214571 | 27/164 (16%) | ||
| RasGEF | 1016..1245 | CDD:214539 | 68/193 (35%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2063 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.940 | |||||