Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011536054.1 | Gene: | RAPGEF3 / 10411 | HGNCID: | 16629 | Length: | 938 | Species: | Homo sapiens |
Alignment Length: | 1116 | Identity: | 264/1116 - (23%) |
---|---|---|---|
Similarity: | 405/1116 - (36%) | Gaps: | 427/1116 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 84 EEDLAESMDSLTVR--DAVRD-CLEKDPAERSEEDVEVLLEFTQGLKAFTNITLAVRRALCSVMV 145
Fly 146 FAVVDKAGTVVMSDGEELDSWSVLINGAVE-IEHANGSREELQMGDSFGILPTMDKLYHRGVMRT 209
Fly 210 KCDDCQFVCITQTDYYRIQHQGEENTRRHEDENGFVVMVTELRSIGGAGTDSAGSGGSATGASAS 274
Fly 275 LNMKRGHVVIRGTPERLLQQLVE----ENSMTDP--TYVEDFLLTHRIFIQNPQEVTSKLLHWFD 333
Fly 334 LEQVDAHKTQ------ELRDRVTRVVLLWVNNHFTDFEADYEMMEFLEVFEALLERKKLLSQL-- 390
Fly 391 ---------RLLHIAC---AAKARMRSCTLTRSSRDEPLNFRIVGGYELRGVAIATGNAAVGIYI 443
Fly 444 SHVEPGSKAQDVGLKRGDQIHEVNGQSLDHVTSKRALEILTGTTHLSISVKSNLLGFKEIMQALE 508
Fly 509 HGGGTAGSGSISAGSGSFKSVRSPRRICANDIAKLHGRSDSTTDELSSVSASNRAHMVRLSSVDM 573
Fly 574 LLDQPDCAPPQTPPVSGSGNMASNFMQQLLQSVNNSSAKKSGGNSNSDQQD--TKGGFMTLAPKR 636
Fly 637 RLQKALAKMNLLNKQNHGSSLNDSSDTLLNDPKSKLSAVSSCSSSTQSSINGCTVSGGGRLYQSQ 701
Fly 702 SNPDLTSLNYDGGSDAGGNGGGRLQVNYLNAHIHRPSAASTLTTNSTQSHLLPDYPDHVLKVYKA 766
Fly 767 DQTCKYVLIYKETTAHEVVMLTLQEFGIHDPSSNFSLCEVSVGDGGMVKQRRLPDQLQNLAERIS 831
Fly 832 FAARYYLKLNDSTEPLVPDELALELVRESNVHFLHLNAYELAIQLTLQD---FANFRQIESTEYV 893
Fly 894 DELFELRSRYGVPMLSKFAELVNREMFWVVSEICAEHNIVRRMKIVKQFIKIARHCKECRNFNSM 958
Fly 959 FAIVSGLGHGAVSRLRQTWEKLPSKYQRLFNDLQDLMDPSRNMSKYRQLVSAELLAQHPIIPFYP 1023
Fly 1024 IVKKDLTFIHLGNDTRVDGLINFEKLRMLAKEVRLLTHMCSS--PYDLLSILELKGQSPSNALFS 1086
Fly 1087 LNQMSASQSNAAAGTVIAANAGQATIKRRKKSTAAPNPKKMFEEAQMVRRVKAYLNSLKILSDED 1151
Fly 1152 LLHKFSLECEP 1162 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | 33/109 (30%) |
RasGEFN | 279..400 | CDD:214571 | 41/146 (28%) | ||
PDZ_signaling | 404..494 | CDD:238492 | 10/89 (11%) | ||
DegQ | <422..494 | CDD:223343 | 5/71 (7%) | ||
PDZ_GEF_RA | 757..841 | CDD:176380 | 9/83 (11%) | ||
RasGEF | 871..1050 | CDD:279011 | 78/181 (43%) | ||
Rhomboid_SP | 1252..>1357 | CDD:289371 | |||
RAPGEF3 | XP_011536054.1 | DEP_Epac | 100..238 | CDD:239884 | 10/24 (42%) |
CAP_ED | 262..371 | CDD:237999 | 32/108 (30%) | ||
Crp | 283..>361 | CDD:223736 | 24/77 (31%) | ||
REM | 407..526 | CDD:100121 | 37/119 (31%) | ||
RasGEF | 673..905 | CDD:238087 | 96/267 (36%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3629 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |