DRSC/TRiP Functional Genomics Resources

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Protein Alignment PDZ-GEF and Ralgdsl7

DIOPT Version :10

Sequence 1:NP_609012.2 Gene:PDZ-GEF / 33881 FlyBaseID:FBgn0265778 Length:1573 Species:Drosophila melanogaster
Sequence 2:XP_017453122.1 Gene:Ralgdsl7 / 102552619 RGDID:7567332 Length:206 Species:Rattus norvegicus


Alignment Length:119 Identity:26/119 - (21%)
Similarity:45/119 - (37%) Gaps:44/119 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 TPERLLQQLVEENSMTDPTYVEDFLLTHRIFIQNPQEVTSKLLHWFDLEQVDAHKTQELRDRVTR 351
            ||.::|..|...:|...|...||            ::|.:.|  |..||                
  Rat    98 TPLQILDLLFVRHSYLSPYSKED------------EQVKNTL--WSFLE---------------- 132

  Fly   352 VVLLWVN-NHFTDF--EADYEMMEFLEVF--------EALLERKKLLSQLRLLH 394
               .|:: |.:.||  .:|...:::||.:        :.::..|.||:||:..|
  Rat   133 ---TWMDKNPWMDFCDPSDMLPLQYLEAYLSVYIPNSDLIVRVKILLTQLQEKH 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDZ-GEFNP_609012.2 CAP_ED 128..237 CDD:237999
RasGEFN 279..400 CDD:214571 26/119 (22%)
PDZ_RapGEF2_RapGEF6-like 404..496 CDD:467237
RA_PDZ-GEF1 759..841 CDD:340483
RasGEF 871..1050 CDD:459872
Ralgdsl7XP_017453122.1 None
Blue background indicates that the domain is not in the aligned region.

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