Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005162410.1 | Gene: | rapgef3 / 101886094 | ZFINID: | ZDB-GENE-090312-38 | Length: | 885 | Species: | Danio rerio |
Alignment Length: | 1159 | Identity: | 252/1159 - (21%) |
---|---|---|---|
Similarity: | 406/1159 - (35%) | Gaps: | 444/1159 - (38%) |
- Green bases have known domain annotations that are detailed below.
Fly 35 HQKCNRGSHSSDTSSAYSGSDTMASNYASSLEAEEIDLSGLVESVVDSDEEDLAESMDSLTVR-- 97
Fly 98 -DAVRD-CLEKDPAERSEEDVEVLLEFTQGLKAFTNITLAVRRALCSVMVFAVVDKAGTVVMSDG 160
Fly 161 EELDSWSVLINGAVE-IEHANGSREELQMGDSFGILPTMDKLYHRGVMRTKCDDCQFVCITQTDY 224
Fly 225 YRIQHQGEENTRRHEDENGFVVMVTELRSIGGAGTDSAGSGGSATGASASLNMKRGHVVIRGTPE 289
Fly 290 RLLQQLVEENSM-------TDPTYVEDFLLTHRIFIQNPQEVTSKLLHWFDLEQVDAHKTQELRD 347
Fly 348 RVTRVVLLWVNNHFTDFEADYEMMEFLEVFEALLERKKLLSQLRLLHIACAAKARMRSCTLTRSS 412
Fly 413 RDEPLNFRIVGGYELRGVAIATGNAAVGIYISHVEPGSKAQDVGLKRGDQIHEVNGQSLDHVTSK 477
Fly 478 RALEILTGTTHLSISVKSNLLGFKEIMQALEHGGGTAGSGSISAGSGSFKSVRSPRRICANDIAK 542
Fly 543 LHGRSDSTTDELSSVSASNRAHMVRLSSVDMLLDQPDCAPPQTPPVSGSGNMASNFMQQLLQSVN 607
Fly 608 NSSAKKSGGNSNSDQQDTKGGFMTLAPKRRLQKALAKMNLLNKQNHGSSLNDSSDTLLNDPKSKL 672
Fly 673 SAVSSCSSSTQSSINGCTVSGGGRLYQSQSNPDLTSLNYDGGSDAGGNGGGRLQVNYLNAHIHRP 737
Fly 738 SAASTLTTNSTQSHLLPDYPDHVLKVYKADQTCKYVLIYKETTAHEVVMLTLQEFGIHDPSSNFS 802
Fly 803 LCEV-SVGDGGMVKQRRLPDQLQNLAERISFAA--RYYLKLNDSTEPLVPDELALELVRESNVHF 864
Fly 865 LHLNAYELAIQLTLQDFANFRQIESTEYVDELFELRSRYG--VPMLSKFAELVNREMFWVVSEIC 927
Fly 928 AEHNIVRRMKIVKQFIKIARHCKECRNFNSMFAIVSGLGHGAVSRLRQTWEKLPSKYQRLFNDLQ 992
Fly 993 DLMDPSRNMSKYRQLVSAELLAQHPIIPFYPIVKKDLTFIHLGNDTRVDGLINFEKLRMLAKEVR 1057
Fly 1058 LLTHMCSSPYDLLSILELKGQSPSNALFSLNQMSASQSNAAAGTVIAANAGQATIKRRKKSTAAP 1122
Fly 1123 NPKKMFEEAQMVR---------------RVKAYLNSLKILSDEDLLHKFSLECE 1161 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | 37/109 (34%) |
RasGEFN | 279..400 | CDD:214571 | 22/127 (17%) | ||
PDZ_signaling | 404..494 | CDD:238492 | 8/89 (9%) | ||
DegQ | <422..494 | CDD:223343 | 5/71 (7%) | ||
PDZ_GEF_RA | 757..841 | CDD:176380 | 15/86 (17%) | ||
RasGEF | 871..1050 | CDD:279011 | 74/180 (41%) | ||
Rhomboid_SP | 1252..>1357 | CDD:289371 | |||
rapgef3 | XP_005162410.1 | DEP_Epac | 71..198 | CDD:239884 | 20/74 (27%) |
CAP_ED | 222..331 | CDD:237999 | 36/108 (33%) | ||
Crp | 241..>321 | CDD:223736 | 25/79 (32%) | ||
RasGEFN | 353..485 | CDD:214571 | 49/392 (13%) | ||
RasGEF | 620..884 | CDD:214539 | 94/313 (30%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3629 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |