Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_002942408.2 | Gene: | rasgrf2 / 100486502 | XenbaseID: | XB-GENE-483993 | Length: | 1232 | Species: | Xenopus tropicalis |
Alignment Length: | 1324 | Identity: | 252/1324 - (19%) |
---|---|---|---|
Similarity: | 436/1324 - (32%) | Gaps: | 424/1324 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 43 HSSDTSSAYSGSDTMASNY---ASSLEAEEIDLSGLVESVVDSDEEDLAESMDSLTVRDAVRDCL 104
Fly 105 EK-DPAERSEEDVEVLLEFTQGLKAFTNITLAVRRALCSVMVFAVVDKAGTVVMSDGEELDSWSV 168
Fly 169 LINGAVEIEHANGSREELQMGDSFGILPTMDKLYHRGVMRTKC------------------DDCQ 215
Fly 216 FVCI---TQTDYYRIQHQG---------------------------EENTRRHEDENGFVVMVTE 250
Fly 251 LRSIGGAGTDSAGSGGSATGASASLNMKRGHVVIRGTPERLLQQLVEENSMTDPTYVEDFLLTHR 315
Fly 316 IFIQNPQEVTSKLLHWFDLEQVDAHKTQELRDR------------VTRVVLLWVNNHFTDFE--- 365
Fly 366 --ADYEMMEFLEVFEALLE------RKKLLSQLRLLHIACAAKARMRSCTLTRSSRDEPLNF--- 419
Fly 420 -----RIVGGYELRGVAIATGNAAVGIYISHVEPGSKAQDVGLKRGDQIHEVNGQSLDHVTSKRA 479
Fly 480 LEILTGTTH----LSISVKSNLLGFKEIMQALEHGGGTAGSGSISAGSGSFKSVRSPRRICANDI 540
Fly 541 AKLHGRSDSTTDELSSVSASNRAHMVRLSSVDMLLDQPDCAPPQTPPVSGSGNMASNFMQQLLQS 605
Fly 606 VNNSSAKKSGGNSNSDQQDTKGGFMTL-------------APKRRLQKALAKMNLLN--KQNH-- 653
Fly 654 -------GSSLNDSSDTL------LNDP-KSKLSAVSSCSSSTQSSINGCTVSGGGRLYQSQSNP 704
Fly 705 -------------DLTSLNYDGGSDAGGNGGGRLQV-NYLNAHIHR-------------PSAAST 742
Fly 743 LTTNSTQSHLLPDYPDHVLKVYKADQTCKYVLIYKETTAHEVVMLTLQEFGIH-DPSSNFSLCEV 806
Fly 807 SVGDG---GMVKQRRLPDQ------------LQNLAERIS-----FAARYYLKLNDST------- 844
Fly 845 EP-LVPDE--------LALELVRESNVHFL-----------------HLNAYELAIQLTLQDFAN 883
Fly 884 FRQIESTEYVDELF---ELRSRYGVPMLSKFAELVNREMFWVVSEICAEHNIVRRMKIVKQFIKI 945
Fly 946 ARHCKECRNFNSMFAIVSGLGHGAVSRLRQTWEKLPSKYQRLFNDLQDLMDPSRNMSKYRQLVSA 1010
Fly 1011 ELLAQHPIIPFYPIVKKDLTFIHLG--NDTRVDGLINFEKLRMLAKEVRLLTHMCSSPYDLLSIL 1073
Fly 1074 ELKGQSPSNALFSLNQMSASQSNAAAGTVIAANAGQATIKRRKKSTAAPNPKKMFEEAQMVRRVK 1138
Fly 1139 AYLNSLKILSDEDLLHKFSLECEP 1162 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | 19/156 (12%) |
RasGEFN | 279..400 | CDD:214571 | 30/143 (21%) | ||
PDZ_signaling | 404..494 | CDD:238492 | 19/101 (19%) | ||
DegQ | <422..494 | CDD:223343 | 15/75 (20%) | ||
PDZ_GEF_RA | 757..841 | CDD:176380 | 20/104 (19%) | ||
RasGEF | 871..1050 | CDD:279011 | 52/183 (28%) | ||
Rhomboid_SP | 1252..>1357 | CDD:289371 | |||
rasgrf2 | XP_002942408.2 | PH_RasGRF1_2 | 19..154 | CDD:270081 | 4/28 (14%) |
RhoGEF | 243..424 | CDD:214619 | 35/230 (15%) | ||
PH | 488..582 | CDD:365918 | 18/104 (17%) | ||
RasGEF_N | 634..>682 | CDD:366199 | 11/73 (15%) | ||
REM | <896..967 | CDD:383003 | 13/70 (19%) | ||
RasGEF | 993..1229 | CDD:214539 | 74/304 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |