Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012808636.1 | Gene: | rgl3 / 100485337 | XenbaseID: | XB-GENE-493046 | Length: | 712 | Species: | Xenopus tropicalis |
Alignment Length: | 752 | Identity: | 136/752 - (18%) |
---|---|---|---|
Similarity: | 242/752 - (32%) | Gaps: | 263/752 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 743 LTTNSTQSHLLPDYPDHVLKVYKADQTCKYVLIYKETTAHEVVMLTLQEFGIHDPS--------- 798
Fly 799 ---SNFSLCEVSVGDGGMVKQRRLPDQLQNLAERISFAARYYLKLNDSTEPLVPDELALELVRES 860
Fly 861 ------NVHFLHLNAYELAIQLTLQDFANFRQIESTEYVDELFELR----SRYGVPMLSKFAELV 915
Fly 916 NREMFWVVSEICAEHNI--VRRMKIVKQFIKIARHCKECRNFNSMFAIVSGLGHGAVSRLRQTWE 978
Fly 979 KLPSKYQRLFNDLQDLMDPSRNMSKYRQLVSAELL----------AQHPI--------------- 1018
Fly 1019 -IPFYPIVKKDLTFIHLG-NDTRVDGLINFEKLR----MLAKEVRLLTHMCSSPYDLLSILELKG 1077
Fly 1078 QSPSNALFSLNQMSASQSNAAAGTVIAANAGQATIKRRKKSTAAPNPKKMFEEAQMVRRVKAYLN 1142
Fly 1143 SLKILSDEDLLHKFSLECEPAHGSTYSGSISHGNTSHRSGGGGSISGGAGGSSGGGGGGSSSLNA 1207
Fly 1208 GDQLSIYSHTSSSSAPN-SSLSLRKRHPSSPTLSTTSSTSSTSDHQRRQMHNNGPKFGTASPQAV 1271
Fly 1272 KKMLSLSESSKIRPHQPFVPRHGSTMAGVIPPLHHMHAAHGFSTPSPGGVVTSPATSAVANVQCT 1336
Fly 1337 PSPSPCSHRRLA-----------SGGNII---------PSRAIHERS---HSDTPAPPPPLPSVD 1378
Fly 1379 LSLESSSVTTFRDLPLRKSVTSGSISSCDSGYVHQQQ 1415 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | |
RasGEFN | 279..400 | CDD:214571 | |||
PDZ_signaling | 404..494 | CDD:238492 | |||
DegQ | <422..494 | CDD:223343 | |||
PDZ_GEF_RA | 757..841 | CDD:176380 | 13/95 (14%) | ||
RasGEF | 871..1050 | CDD:279011 | 50/211 (24%) | ||
Rhomboid_SP | 1252..>1357 | CDD:289371 | 14/124 (11%) | ||
rgl3 | XP_012808636.1 | RasGEF_N | 91..191 | CDD:366199 | 10/66 (15%) |
RasGEF | 246..517 | CDD:214539 | 66/289 (23%) | ||
RA_RalGDS_like | 623..708 | CDD:340449 | 18/88 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |