Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_012811943.1 | Gene: | rapgef2 / 100145659 | XenbaseID: | XB-GENE-5814345 | Length: | 1661 | Species: | Xenopus tropicalis |
Alignment Length: | 1604 | Identity: | 585/1604 - (36%) |
---|---|---|---|
Similarity: | 813/1604 - (50%) | Gaps: | 326/1604 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 34 LHQKCNR--GSHSSDTSSAYSGSDTMASNY-ASSLEAEEIDLSGLVESVVDS----DEEDLAESM 91
Fly 92 DSLTVRDAVRDCLEKDPAERSEEDVEVLLEFTQGLKAFTNITLAVRRALCSVMVFAVVDKAGTVV 156
Fly 157 MSDGEELDSWSVLINGAVEIEHANGSREELQMGDSFGILPTMDKLYHRGVMRTKCDDCQFVCITQ 221
Fly 222 TDYYRIQHQGEENTRRHEDENGFVVMVTELRSIGGAGTDSAGSGGSATGASASLNMKRGHVVIRG 286
Fly 287 TPERLLQQLVEENSMTDPTYVEDFLLTHRIFIQNPQEVTSKLLHWFDLEQVDAHKTQELRDRVTR 351
Fly 352 VVLLWVNNHFTDFEADYEMMEFLEVFEALLERKKLLSQLRLLHIACAAKARMRSCTLTRSSRDEP 416
Fly 417 LNFRIVGGYELRGVAIATGNAAVGIYISHVEPGSKAQDVGLKRGDQIHEVNGQSLDHVTSKRALE 481
Fly 482 ILTGTTHLSISVKSNLLGFKEIM-QALEHGGGTAGSGSISAGSGSFKSVRSPRRICANDIAKLHG 545
Fly 546 RSDSTTDELSSVSASNRAHMVRLSSVDMLLDQPDCAPPQTPPVSGSGNMASNFMQQLLQSVNNSS 610
Fly 611 AKKSGGNSNSDQQDTKGGFMTLAPKRRLQKALAKMN---LLNKQNHGSSLNDSSDTLLNDPKSKL 672
Fly 673 SAVSSCSSSTQSSINGCTVSGGGRLYQSQSNPDLTSLNYDGGSDAGGNGGGRLQVNYLNAHIHRP 737
Fly 738 SAASTLTTNSTQSHLLPDYPDHVLKVYKADQTCKYVLIYKETTAHEVVMLTLQEFGIHDPSSNFS 802
Fly 803 LCEVSVGDGGMVKQRRLPDQLQNLAERISFAARYYLKLNDSTEPLVPDELALELVRESNVHFLHL 867
Fly 868 NAYELAIQLTLQDFANFRQIESTEYVDELFELRSRYGVPMLSKFAELVNREMFWVVSEICAEHNI 932
Fly 933 VRRMKIVKQFIKIARHCKECRNFNSMFAIVSGLGHGAVSRLRQTWEKLPSKYQRLFNDLQDLMDP 997
Fly 998 SRNMSKYRQLVSAELLAQHPIIPFYPIVKKDLTFIHLGNDTRVDGLINFEKLRMLAKEVRLLTHM 1062
Fly 1063 CSSPYDLLSILELKGQSPSNALFSLNQMSASQSNAAAGTV--IAANAGQATIKRRKKSTAAPNPK 1125
Fly 1126 KMFEEAQMVRRVKAYLNSLKILSDEDLLHKFSLECEPAHGSTYSGSISHGNTSHRSGGGGSISGG 1190
Fly 1191 AGGSSGGGGGGSSSLNAGDQLSIYSHTSSSSAPNSSLSLRKRHPSSPTLSTTSSTSSTSDHQRRQ 1255
Fly 1256 M--HNNGPKFGTASPQAVKKMLSLSESSKIRPHQPFV---------------------PRHGSTM 1297
Fly 1298 A--GVIPPLH----------------------HMH----AAHGFSTPSPG-GVVTSPATSAVANV 1333
Fly 1334 QCT-PSPSPCSHRR-LASGGNIIPSRAIHERSHSDTPAPPPPLPSVD------LSLESSSVTTFR 1390
Fly 1391 DLPLRKS---------------------VTSGSISSCDSGYVHQQQHYHLQYQQ-----QQQQNS 1429
Fly 1430 SQHEPSPPVY---TAADCRLLQQISNNAVTRNLNSPCQSTNTPPST-PTPPPNQPTATIQLSAPP 1490
Fly 1491 TAAAYMHARSQHQQLQQQQQSLAMPPPPPPPYNVPPLGSIYSHH 1534 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | 70/108 (65%) |
RasGEFN | 279..400 | CDD:214571 | 72/120 (60%) | ||
PDZ_signaling | 404..494 | CDD:238492 | 41/89 (46%) | ||
DegQ | <422..494 | CDD:223343 | 32/71 (45%) | ||
PDZ_GEF_RA | 757..841 | CDD:176380 | 46/83 (55%) | ||
RasGEF | 871..1050 | CDD:279011 | 110/178 (62%) | ||
Rhomboid_SP | 1252..>1357 | CDD:289371 | 36/158 (23%) | ||
rapgef2 | XP_012811943.1 | Crp | 31..>147 | CDD:223736 | |
CAP_ED | 37..143 | CDD:237999 | |||
cNMP | 297..412 | CDD:197516 | 72/115 (63%) | ||
RasGEFN | 428..541 | CDD:214571 | 72/120 (60%) | ||
PDZ_signaling | 545..625 | CDD:238492 | 41/89 (46%) | ||
UBQ | 767..851 | CDD:294102 | 46/83 (55%) | ||
RasGEF | 874..1099 | CDD:238087 | 126/229 (55%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 240 | 1.000 | Domainoid score | I2218 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 873 | 1.000 | Inparanoid score | I405 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D21656at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002053 | |
OrthoInspector | 1 | 1.000 | - | - | otm49105 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1353 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 6.060 |