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Protein Alignment PDZ-GEF and rapgef4b
DIOPT Version :9
Sequence 1: | NP_609012.2 |
Gene: | PDZ-GEF / 33881 |
FlyBaseID: | FBgn0265778 |
Length: | 1573 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001108368.1 |
Gene: | rapgef4b / 100141331 |
ZFINID: | ZDB-GENE-080219-4 |
Length: | 427 |
Species: | Danio rerio |
Alignment Length: | 121 |
Identity: | 41/121 - (33%) |
Similarity: | 69/121 - (57%) |
Gaps: | 15/121 - (12%) |
- Green bases have known domain annotations that are detailed below.
Fly 65 LEAEEIDLSGLVESVVDSD------EEDLAESMDSLTV--RDA-VRDCLEKDPAERSEEDVEVLL 120
|:.||.| :|:.|| ||:|.|::..|:. .|| :|..|.|.|.:|:.||:|::.
Zfish 288 LDDEEED------AVLPSDDEKREAEEELQETLLFLSQIGPDAHMRMILRKPPGQRTAEDLEIIY 346
Fly 121 EFTQGLKAFTNITLAVRRALCSVMVFAVVDKAGTVVMSDGEELDSWSVLINGAVEI 176
:....:||.::::..|:|.|..|::|....|||||:.:.|||..||.::..|:|.:
Zfish 347 DELLHIKAVSHLSNTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIIQKGSVNV 402
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3629 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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