Sequence 1: | NP_609012.2 | Gene: | PDZ-GEF / 33881 | FlyBaseID: | FBgn0265778 | Length: | 1573 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001093748.2 | Gene: | rasgrp1 / 100101791 | XenbaseID: | XB-GENE-489811 | Length: | 811 | Species: | Xenopus tropicalis |
Alignment Length: | 707 | Identity: | 143/707 - (20%) |
---|---|---|---|
Similarity: | 233/707 - (32%) | Gaps: | 231/707 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 785 VMLTLQEFGIHDPSSNFSLCEVSVGDGGMVKQRRL-PDQLQN----LAERISFAARYYL------ 838
Fly 839 -----KLNDSTEPLVP------DELALELV-------------------------RESNVHFLHL 867
Fly 868 NAYELAIQLTLQDFANFRQIESTEYVDELFELRSRYGV-------PMLSKFAELVNREMFWVVSE 925
Fly 926 ICAEHNIVRRMKIVKQFIKIARHCKECRNFNSMFAIVSGLGHGAVSRLRQTWEKLPSKYQRLFND 990
Fly 991 LQDLMDPSRNMSKYRQLVSAELLAQHPIIPFYPIVKKDLTFIHLG-NDTRVDGLINFEKLRMLAK 1054
Fly 1055 EVRLLTHM------CSSPYDLLSILELKGQ--SPSNALFSLNQMSASQSNAAAGT------VIAA 1105
Fly 1106 NAGQATIKRRKKSTAAPNPKKMFEEAQ-MVRRV-KAY-LNSLKILSDED---------------- 1151
Fly 1152 -----------------------------LLHKFS-------LECEPAHGSTYSGSISHGNTSHR 1180
Fly 1181 SGGG----------------GSISGGAGGS---SG------GGGGGSSSLNAGDQLSIYSHTSSS 1220
Fly 1221 SAPNSSLSLRKRHPSSPTLSTTSSTSSTSDHQRRQMHNNGPKFGTASPQAVKKMLSLSESSKIRP 1285
Fly 1286 HQPFVPRHGSTMAGVIPPLHHMHAAHGFSTPSPGGVVTSPATSAVANVQCTPSPSPC 1342 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDZ-GEF | NP_609012.2 | CAP_ED | 128..237 | CDD:237999 | |
RasGEFN | 279..400 | CDD:214571 | |||
PDZ_signaling | 404..494 | CDD:238492 | |||
DegQ | <422..494 | CDD:223343 | |||
PDZ_GEF_RA | 757..841 | CDD:176380 | 18/71 (25%) | ||
RasGEF | 871..1050 | CDD:279011 | 49/186 (26%) | ||
Rhomboid_SP | 1252..>1357 | CDD:289371 | 18/91 (20%) | ||
rasgrp1 | NP_001093748.2 | REM | 77..193 | CDD:100121 | 23/101 (23%) |
RasGEF | 217..453 | CDD:214539 | 60/246 (24%) | ||
EF-hand_7 | 494..543 | CDD:372618 | 6/48 (13%) | ||
C1_1 | 558..607 | CDD:365894 | 8/49 (16%) | ||
BRLZ | 744..799 | CDD:197664 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |